RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TMEM51Q9NW97 253 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 ANKRD10Q9NXR5 420 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 NDRG3Q9UGV2 375 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 DYTNA2CJ06 578 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 SRRM3A6NNA2 597 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 KLRF2D3W0D1 207 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 LDLRAD4O15165 306 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 KIF1CO43896 1103 aaKnown RBP4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 KLK8O60259 260 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 TACC1O75410 805 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 PPP1R3DO95685 299 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 T-ENOLP0DO92 83 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 PIGAP37287 484 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 COMPP49747 757 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 EGR4Q05215 589 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 GRSF1Q12849 480 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 TRPC3Q13507 836 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 KIAA1161Q6NSJ0 714 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 CRELD2Q6UXH1 353 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 ERGIC1Q969X5 290 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 HVCN1Q96D96 273 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 DDX4Q9NQI0 724 aaKnown RBP4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 BEX4Q9NWD9 120 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 KIAA1456Q9P272 454 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 IL36RNQ9UBH0 155 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 A3GALT2U3KPV4 340 aa4.63□□□□□ -1.67
HMGB1P49-201ENST00000418882 NOTCH4Q99466 2003 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 GOLGA6L10A0A0M3HER8 536 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 LINC01553A4QN01 128 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 ASAP2O43150 1006 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 RGS11O94810 467 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 CBSLP0DN79 551 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 CBSP35520 551 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 CDH15P55291 814 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 DSCR9P59020 149 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 GRIK3Q13003 919 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 SOWAHAQ2M3V2 549 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 PRICKLE4Q2TBC4 344 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 SERTAD4-AS1Q5TG53 156 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 ZNF324BQ6AW86 544 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 HIST2H2BCQ6DN03 193 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 HIST2H2BDQ6DRA6 164 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 NCAPH2Q6IBW4 605 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 CES5AQ6NT32 575 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 TMEM81Q6P7N7 255 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 BHLHA9Q7RTU4 235 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 GPAT4Q86UL3 456 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 FJX1Q86VR8 437 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 SMAP1Q8IYB5 467 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 CCDC105Q8IYK2 499 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 KIAA2013Q8IYS2 634 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 ESX1Q8N693 406 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 GJC3Q8NFK1 279 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 TNIP2Q8NFZ5 429 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 OR14A16Q8NHC5 309 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 TMED6Q8WW62 240 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 SNAPC3Q92966 411 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 MED30Q96HR3 178 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 KRTAP1-5Q9BYS1 174 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 C20orf141Q9NUB4 165 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 IL1RAPL1Q9NZN1 696 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 CNOT7Q9UIV1 285 aaKnown RBP4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 AGO1Q9UL18 857 aaKnown RBP4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 SLC45A1Q9Y2W3 748 aa4.62□□□□□ -1.67
HMGB1P49-201ENST00000418882 DOCK7Q96N67 2140 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 IGLV5-52A0A0A0MRZ9 124 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 TNPO2O14787 897 aaKnown RBP4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 GLUD1P00367 558 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 GALTP07902 379 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 TFPIP10646 304 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 SLC2A4P14672 509 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 GPD2P43304 727 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 GLUD2P49448 558 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 VAMP2P63027 116 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 SETMARQ53H47 684 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 CCDC129Q6ZRS4 1044 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 TBC1D26Q86UD7 250 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 SFTPA2Q8IWL1 248 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 PARP16Q8N5Y8 322 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 AADATQ8N5Z0 425 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 NUDCD2Q8WVJ2 157 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 APOPT1Q96IL0 206 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 EIF2AK1Q9BQI3 630 aaKnown RBP4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 SEZ6LQ9BYH1 1024 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 AGXT2Q9BYV1 514 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 IL25Q9H293 177 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 CYSLTR2Q9NS75 346 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 BABAM1Q9NWV8 329 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 OCIAD1Q9NX40 245 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 PDP2Q9P2J9 529 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 TBX20Q9UMR3 447 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 CRYL1Q9Y2S2 319 aa4.61□□□□□ -1.67
HMGB1P49-201ENST00000418882 A0A1B0GVM2 712 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 TYW5A2RUC4 315 aaKnown RBP4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 PAPSS2O95340 614 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 AGR2O95994 175 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 HEXAP06865 529 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 IFIT1P09914 478 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms