RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 CINPQ9BW66 212 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-206ENST00000417540 CEP41Q9BYV8 373 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 IP6K2Q9UHH9 426 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 SALL4Q9UJQ4 1053 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 ZNF106Q9H2Y7 1883 aaKnown RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 A0A1B0GTQ1 180 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 TSPAN11A1L157 253 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 POM121BA6NF01 834 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 IGLON5A6NGN9 336 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 ARHGAP42A6NI28 874 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 C3orf70A6NLC5 250 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 AREL1O15033 823 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 SCAMP1O15126 338 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 VILLO15195 856 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 CASC3O15234 703 aaKnown RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 KRT1P04264 644 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 H2AFZP0C0S5 128 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 FTH1P19P0C7X4 201 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 THEGLP0DJG4 465 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 MYF5P13349 255 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 DESP17661 470 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 GM2AP17900 193 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 CSRP1P21291 193 aaKnown RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 SDHBP21912 280 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 HTR7P34969 479 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 MMP12P39900 470 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 NOP2P46087 812 aaKnown RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 NDST2P52849 883 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 C21orf59P57076 290 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 YBEYP58557 167 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 TRAF2Q12933 501 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 BNIP3Q12983 259 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 DNAJC3Q13217 504 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 PIGHQ14442 188 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 IRF4Q15306 451 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 MYLK3Q32MK0 819 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 SETMARQ53H47 684 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 ZNF805Q5CZA5 627 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 ZNF542PQ5EBM4 170 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 TMCO4Q5TGY1 634 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 TMCO3Q6UWJ1 677 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 GDPD4Q6W3E5 623 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 RAD9BQ6WBX8 426 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 H2AFVQ71UI9 128 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 KANSL1Q7Z3B3 1105 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 CNGA4Q8IV77 575 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 RBFAQ8N0V3 343 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 FAM71BQ8TC56 605 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 RFFLQ8WZ73 363 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 FAF2Q96CS3 445 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 KLF6Q99612 283 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 CALN1Q9BXU9 219 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 TCEAL2Q9H3H9 227 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 PCDH12Q9NPG4 1184 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 GPR27Q9NS67 375 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 UCKL1Q9NWZ5 548 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 IPO11Q9UI26 975 aaKnown RBP10.34□□□□□ -0.75
HDLBP-206ENST00000417540 HPCAL4Q9UM19 191 aa10.34□□□□□ -0.75
HDLBP-206ENST00000417540 ZSCAN5CA6NGD5 496 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 UPK3BL1B0FP48 263 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 UPK3BL2E5RIL1 263 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 MAFKO60675 156 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 MMP20O60882 483 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 PALMO75781 387 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 HLA-DQB2P05538 268 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 CELA2BP08218 269 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 C6P13671 934 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 TIMP2P16035 220 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 HNRNPA2B1P22626 353 aaKnown RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 MAN1A1P33908 653 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 ARL4AP40617 200 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 GEMIN4P57678 1058 aaKnown RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 SLC10A2Q12908 348 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 ZBTB17Q13105 803 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 LBRQ14739 615 aaKnown RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 TEAD4Q15561 434 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 FBXL19Q6PCT2 694 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 KYAT3Q6YP21 454 aaKnown RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 SLCO6A1Q86UG4 719 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 TMEM139Q8IV31 216 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 PSTKQ8IV42 348 aaKnown RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 TP53I13Q8NBR0 393 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 SLC35G2Q8TBE7 412 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 SETD7Q8WTS6 366 aaKnown RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 PPP1R9BQ96SB3 815 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 ELF4Q99607 663 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 MGME1Q9BQP7 344 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 ZNF670Q9BS34 389 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 HERPUD2Q9BSE4 406 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 TMEM121BQ9BXQ6 578 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 ZDHHC5Q9C0B5 715 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 MBNL1Q9NR56 388 aaKnown RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 TMEM51Q9NW97 253 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 UVRAGQ9P2Y5 699 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 TRIM10Q9UDY6 481 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 FARP1Q9Y4F1 1045 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 ZFC3H1O60293 1989 aaKnown RBP10.33□□□□□ -0.76
HDLBP-206ENST00000417540 BSNQ9UPA5 3926 aa10.33□□□□□ -0.76
HDLBP-206ENST00000417540 LRRD1A4D1F6 860 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms