RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 NCAPGQ9BPX3 1015 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 C1QTNF7Q9BXJ2 289 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 NRSN2Q9GZP1 204 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 SCUBE2Q9NQ36 999 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 UBA2Q9UBT2 640 aaPredicted RBP25.65■■□□□ 1.7
VEGFA-208ENST00000417285 CNOT8Q9UFF9 292 aaKnown RBP25.65■■□□□ 1.7
VEGFA-208ENST00000417285 CSNK1G3Q9Y6M4 447 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 SCINQ9Y6U3 715 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 TMEM191CA6NGB0 347 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 GOLGA6L19H0YKK7 550 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 H3BM21 787 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 DDX3XO00571 662 aaKnown RBP eCLIP25.64■■□□□ 1.77e-12■■■■□ 20
VEGFA-208ENST00000417285 TOR1BO14657 336 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 RIOK3O14730 519 aaKnown RBP25.64■■□□□ 1.7
VEGFA-208ENST00000417285 FFAR2O15552 330 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 NME1P15531 152 aaKnown RBP25.64■■□□□ 1.7
VEGFA-208ENST00000417285 DUSP3P51452 185 aaPredicted RBP25.64■■□□□ 1.7
VEGFA-208ENST00000417285 PTK2BQ14289 1009 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 PSTKQ8IV42 348 aaKnown RBP25.64■■□□□ 1.7
VEGFA-208ENST00000417285 FAM181AQ8N9Y4 354 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 FNIP1Q8TF40 1166 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 CENPTQ96BT3 561 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 ZNF653Q96CK0 615 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 LRRC19Q9H756 370 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 AP4E1Q9UPM8 1137 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 CACNA1GO43497 2377 aa25.64■■□□□ 1.7
VEGFA-208ENST00000417285 A0A1W2PQJ5 194 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 GIMD1P0DJR0 217 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 MYBL1P10243 752 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 SKILP12757 684 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 TIMP2P16035 220 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 ZNF135P52742 658 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-208ENST00000417285 UBASH3AP57075 661 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 PFN3P60673 137 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 PDE1CQ14123 709 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-208ENST00000417285 CYTH1Q15438 398 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 ZNF542PQ5EBM4 170 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 DNAAF5Q86Y56 855 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 CXorf40AQ8TE69 158 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 BTN2A2Q8WVV5 523 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 NCKIPSDQ9NZQ3 722 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 GGT7Q9UJ14 662 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 CLCA2Q9UQC9 943 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 ITM2BQ9Y287 266 aa25.63■■□□□ 1.69
VEGFA-208ENST00000417285 ARHGAP42A6NI28 874 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 EEF2KO00418 725 aaKnown RBP25.62■■□□□ 1.69
VEGFA-208ENST00000417285 SPINT1O43278 529 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 DAPK3O43293 454 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 PRAMEF11O60813 436 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 TM7SF2O76062 418 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 XPAP23025 273 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-208ENST00000417285 YPEL5P62699 121 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 ELP6Q0PNE2 266 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 RTP5Q14D33 572 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 TDRD12Q587J7 1177 aaKnown RBP25.62■■□□□ 1.69
VEGFA-208ENST00000417285 C19orf48Q6RUI8 117 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 IQCDQ96DY2 449 aa25.62■■□□□ 1.69
VEGFA-208ENST00000417285 ZNF641Q96N77 438 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-208ENST00000417285 DHX35Q9H5Z1 703 aaKnown RBP25.62■■□□□ 1.69
VEGFA-208ENST00000417285 MRPL47Q9HD33 250 aaKnown RBP25.62■■□□□ 1.69
VEGFA-208ENST00000417285 BZW2Q9Y6E2 419 aaKnown RBP25.62■■□□□ 1.69
VEGFA-208ENST00000417285 K7ESM1 405 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 PRPSAP2O60256 369 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 MMP20O60882 483 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 GP1BAP07359 652 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 HCAR3P49019 387 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 THOP1P52888 689 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 CLDN6P56747 220 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 INSM1Q01101 510 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-208ENST00000417285 DCBLD1Q8N8Z6 715 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 APOLD1Q96LR9 279 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 SUV39H2Q9H5I1 410 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 GPATCH2LQ9NWQ4 482 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 LHX3Q9UBR4 397 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 PCSK1NQ9UHG2 260 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 AK5Q9Y6K8 562 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 ATRXP46100 2492 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 LAMA5O15230 3695 aa25.61■■□□□ 1.69
VEGFA-208ENST00000417285 A0A087WV48 116 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 JUNDP17535 347 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 PBX1P40424 430 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 CSNK1DP48730 415 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 PAPOLAP51003 745 aaKnown RBP25.6■■□□□ 1.69
VEGFA-208ENST00000417285 TMEM52BQ4KMG9 183 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 VPS36Q86VN1 386 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 ARFGAP1Q8N6T3 406 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 ZNF548Q8NEK5 533 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-208ENST00000417285 HNRNPLLQ8WVV9 542 aaKnown RBP25.6■■□□□ 1.69
VEGFA-208ENST00000417285 SYN2Q92777 582 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-208ENST00000417285 TUBGCP5Q96RT8 1024 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 SNRNP25Q9BV90 132 aaKnown RBP25.6■■□□□ 1.69
VEGFA-208ENST00000417285 ISCUQ9H1K1 167 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 PDFQ9HBH1 243 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 MYO1AQ9UBC5 1043 aa25.6■■□□□ 1.69
VEGFA-208ENST00000417285 J3KR12 359 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 TPP1O14773 563 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 AQP9O43315 295 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 MT-CO3P00414 261 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 ACAP1Q15027 740 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 UGP2Q16851 508 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms