RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 OMDQ99983 421 aa12.48□□□□□ -0.41
UBA3-203ENST00000415609 MRPL46Q9H2W6 279 aaKnown RBP12.48□□□□□ -0.41
UBA3-203ENST00000415609 TLR8Q9NR97 1041 aaKnown RBP12.48□□□□□ -0.41
UBA3-203ENST00000415609 VPS45Q9NRW7 570 aa12.48□□□□□ -0.41
UBA3-203ENST00000415609 OLA1Q9NTK5 396 aaKnown RBP12.48□□□□□ -0.41
UBA3-203ENST00000415609 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
UBA3-203ENST00000415609 VWA8A3KMH1 1905 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 IGLV3-10A0A075B6K4 115 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 OR6C75A6NL08 312 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 TARM1B6A8C7 271 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 RAMP2O60895 175 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 PDE5AO76074 875 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 RTN3O95197 1032 aaPredicted RBP12.47□□□□□ -0.41
UBA3-203ENST00000415609 GLDCP23378 1020 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 PRDX6P30041 224 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 SERPINB5P36952 375 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 HK2P52789 917 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 AP2B1P63010 937 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 SP3Q02447 781 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 CMPK2Q5EBM0 449 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 KIAA0408Q6ZU52 694 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 ACAD11Q709F0 780 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 MYLK4Q86YV6 388 aaPredicted RBP12.47□□□□□ -0.41
UBA3-203ENST00000415609 LMNTD2Q8IXW0 634 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 HEXDCQ8WVB3 486 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 SCG3Q8WXD2 468 aaKnown RBP12.47□□□□□ -0.41
UBA3-203ENST00000415609 FATE1Q969F0 183 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 RANBP9Q96S59 729 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 NUF2Q9BZD4 464 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 GPR62Q9BZJ7 368 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBA3-203ENST00000415609 ARNT2Q9HBZ2 717 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 ATP13A1Q9HD20 1204 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 TMEM161AQ9NX61 479 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 CLIC5Q9NZA1 410 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 ZDHHC2Q9UIJ5 367 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 ARHGAP26Q9UNA1 814 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 DOCK4Q8N1I0 1966 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 MOXD2PA6NHM9 499 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 MAP3K7O43318 606 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 MMP2P08253 660 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 ANPEPP15144 967 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 TFEBP19484 476 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 ITGAXP20702 1163 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 EPHA3P29320 983 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 NUMBP49757 651 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 PSEN1P49768 467 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 CSHL1Q14406 222 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 POLD3Q15054 466 aaPredicted RBP12.47□□□□□ -0.41
UBA3-203ENST00000415609 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 DEFB107AQ8IZN7 70 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 CCDC124Q96CT7 223 aaKnown RBP12.47□□□□□ -0.41
UBA3-203ENST00000415609 MRPL57Q9BQC6 102 aaKnown RBP12.47□□□□□ -0.41
UBA3-203ENST00000415609 OSBPL1AQ9BXW6 950 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 POMKQ9H5K3 350 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 GPAMQ9HCL2 828 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 IL37Q9NZH6 218 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 UXTQ9UBK9 157 aaPredicted RBP12.47□□□□□ -0.41
UBA3-203ENST00000415609 VTI1BQ9UEU0 232 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 G3BP2Q9UN86 482 aaKnown RBP12.47□□□□□ -0.41
UBA3-203ENST00000415609 CDYLQ9Y232 598 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 SSX2IPQ9Y2D8 614 aa12.47□□□□□ -0.41
UBA3-203ENST00000415609 A0A1W2PQ45 241 aaPredicted RBP12.46□□□□□ -0.41
UBA3-203ENST00000415609 A0A1W2PQY0 241 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 FAM92AA1XBS5 289 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 MTMR11A4FU01 709 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 EIF4E1BA6NMX2 242 aaKnown RBP12.46□□□□□ -0.41
UBA3-203ENST00000415609 SLCO1B7G3V0H7 640 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 GRID2O43424 1007 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 BAG2O95816 211 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 OR1E1P30953 314 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 ABL2P42684 1182 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 GATMP50440 423 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 CLCN5P51795 746 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 PDCD2Q16342 344 aaPredicted RBP12.46□□□□□ -0.41
UBA3-203ENST00000415609 LSM12Q3MHD2 195 aaKnown RBP12.46□□□□□ -0.41
UBA3-203ENST00000415609 ZNF789Q5FWF6 425 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 SIRPB2Q5JXA9 342 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 RASIP1Q5U651 963 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 NXNQ6DKJ4 435 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 PTAR1Q7Z6K3 402 aaPredicted RBP12.46□□□□□ -0.41
UBA3-203ENST00000415609 LSMEM2Q8N112 164 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 TXNDC5Q8NBS9 432 aaKnown RBP12.46□□□□□ -0.41
UBA3-203ENST00000415609 OR6P1Q8NGX9 317 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 ACTRT2Q8TDY3 377 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 TTC1Q99614 292 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 OLFM1Q99784 485 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 STARD7Q9NQZ5 370 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 NDE1Q9NXR1 346 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 CDH22Q9UJ99 828 aa12.46□□□□□ -0.41
UBA3-203ENST00000415609 CCL22O00626 93 aa12.45□□□□□ -0.42
UBA3-203ENST00000415609 CCNT2O60583 730 aaKnown RBP12.45□□□□□ -0.42
UBA3-203ENST00000415609 PDHA1P08559 390 aa12.45□□□□□ -0.42
UBA3-203ENST00000415609 PIK3R1P27986 724 aa12.45□□□□□ -0.42
UBA3-203ENST00000415609 PRAMEP78395 509 aa12.45□□□□□ -0.42
UBA3-203ENST00000415609 IL10RBQ08334 325 aa12.45□□□□□ -0.42
UBA3-203ENST00000415609 TBL3Q12788 808 aaKnown RBP12.45□□□□□ -0.42
UBA3-203ENST00000415609 MRPL58Q14197 206 aaKnown RBP12.45□□□□□ -0.42
UBA3-203ENST00000415609 FAM83EQ2M2I3 478 aa12.45□□□□□ -0.42
UBA3-203ENST00000415609 PARP15Q460N3 678 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms