RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 KLHL11Q9NVR0 708 aa20.38■□□□□ 0.85
CTTN-205ENST00000415461 NENFQ9UMX5 172 aa20.38■□□□□ 0.85
CTTN-205ENST00000415461 ZZEF1O43149 2961 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 H3BRJ5 948 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 TIMP2P16035 220 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 HCAR3P49019 387 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 ZNF135P52742 658 aaPredicted RBP20.37■□□□□ 0.85
CTTN-205ENST00000415461 SGCGQ13326 291 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 PIGHQ14442 188 aaPredicted RBP20.37■□□□□ 0.85
CTTN-205ENST00000415461 CCDC122Q5T0U0 273 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 CCNI2Q6ZMN8 369 aaPredicted RBP20.37■□□□□ 0.85
CTTN-205ENST00000415461 ZSCAN30Q86W11 494 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 MARCH9Q86YJ5 346 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 ZCCHC14Q8WYQ9 949 aaKnown RBP20.37■□□□□ 0.85
CTTN-205ENST00000415461 GPR27Q9NS67 375 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 UCKL1Q9NWZ5 548 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 DKK3Q9UBP4 350 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 ZMIZ1Q9ULJ6 1067 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.37■□□□□ 0.852e-8■□□□□ 10
CTTN-205ENST00000415461 HS3ST3A1Q9Y663 406 aa20.37■□□□□ 0.85
CTTN-205ENST00000415461 TMEM8BA6NDV4 472 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 PALMO75781 387 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 RARAP10276 462 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 EIF4A3P38919 411 aaKnown RBP20.36■□□□□ 0.85
CTTN-205ENST00000415461 SLC25A11Q02978 314 aaKnown RBP20.36■□□□□ 0.85
CTTN-205ENST00000415461 BOLA3Q53S33 107 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 ZNF542PQ5EBM4 170 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 DHRS13Q6UX07 377 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 TMPRSS7Q7RTY8 843 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 POLNQ7Z5Q5 900 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 NIPA2Q8N8Q9 360 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 TSEN2Q8NCE0 465 aaKnown RBP20.36■□□□□ 0.85
CTTN-205ENST00000415461 CSPG4P5Q96PW8 444 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 WRAP53Q9BUR4 548 aaKnown RBP20.36■□□□□ 0.85
CTTN-205ENST00000415461 CINPQ9BW66 212 aaPredicted RBP20.36■□□□□ 0.85
CTTN-205ENST00000415461 CPEB1Q9BZB8 566 aaKnown RBP20.36■□□□□ 0.85
CTTN-205ENST00000415461 ETNK2Q9NVF9 386 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 IP6K2Q9UHH9 426 aa20.36■□□□□ 0.85
CTTN-205ENST00000415461 COL5A1P20908 1838 aaPredicted RBP20.36■□□□□ 0.85
CTTN-205ENST00000415461 TSPAN11A1L157 253 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 FPGTO14772 594 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 BUB1BO60566 1050 aaPredicted RBP20.35■□□□□ 0.85
CTTN-205ENST00000415461 MMP20O60882 483 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 AMPD1P23109 780 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 DGKAP23743 735 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 HNRNPH3P31942 346 aaKnown RBP20.35■□□□□ 0.85
CTTN-205ENST00000415461 ARL4AP40617 200 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 RABIFP47224 123 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 ACADVLP49748 655 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 TPRG1LQ5T0D9 272 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 CAMK1DQ8IU85 385 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 SLC25A45Q8N413 288 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 RNF214Q8ND24 703 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 DENND6BQ8NEG7 585 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 FAM174AQ8TBP5 190 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 ZNF564Q8TBZ8 553 aaPredicted RBP20.35■□□□□ 0.85
CTTN-205ENST00000415461 CXorf40AQ8TE69 158 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 LENG8Q96PV6 779 aaPredicted RBP20.35■□□□□ 0.85
CTTN-205ENST00000415461 TSPY26PQ9H489 355 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 SUV39H2Q9H5I1 410 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 PCDH18Q9HCL0 1135 aa20.35■□□□□ 0.85
CTTN-205ENST00000415461 TRIM38O00635 465 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 MUSKO15146 869 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 FFAR2O15552 330 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 CBFA2T2O43439 604 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 XPAP23025 273 aaPredicted RBP20.34■□□□□ 0.85
CTTN-205ENST00000415461 IL10RBQ08334 325 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 FZD2Q14332 565 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 GRM3Q14832 879 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 SPECC1LQ69YQ0 1117 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 TMCO3Q6UWJ1 677 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 ZSWIM9Q86XI8 627 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 CPNE8Q86YQ8 564 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 LZTR1Q8N653 840 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 TEKT4Q8WW24 435 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 ASB12Q8WXK4 309 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 PCDH12Q9NPG4 1184 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 DNAJC28Q9NX36 388 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 IPO11Q9UI26 975 aaKnown RBP20.34■□□□□ 0.85
CTTN-205ENST00000415461 TRPM6Q9BX84 2022 aa20.34■□□□□ 0.85
CTTN-205ENST00000415461 SPTY2D1-AS1A0A0U1RR47 76 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 FAM149AA5PLN7 773 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 MYO1FO00160 1098 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 SIGLEC6O43699 453 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 RFPL3O75679 317 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 PIAS2O75928 621 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 PRKCGP05129 697 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 IGFALSP35858 605 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 SSR1P43307 286 aaKnown RBP20.33■□□□□ 0.85
CTTN-205ENST00000415461 CLDN6P56747 220 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 PDE1CQ14123 709 aaPredicted RBP20.33■□□□□ 0.85
CTTN-205ENST00000415461 SMAD1Q15797 465 aaKnown RBP20.33■□□□□ 0.85
CTTN-205ENST00000415461 CFAP58Q5T655 872 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 SRLQ86TD4 932 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 TSC1Q92574 1164 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 CENPTQ96BT3 561 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 ZNF641Q96N77 438 aaPredicted RBP20.33■□□□□ 0.85
CTTN-205ENST00000415461 TUBGCP5Q96RT8 1024 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 DNAJC7Q99615 494 aa20.33■□□□□ 0.85
CTTN-205ENST00000415461 PACSIN1Q9BY11 444 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms