RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 VAT1Q99536 393 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 C1QTNF7Q9BXJ2 289 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 ZDHHC5Q9C0B5 715 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SUV39H2Q9H5I1 410 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 C6orf106Q9H6K1 298 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SEMA4GQ9NTN9 838 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 PLXND1Q9Y4D7 1925 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 GPR179Q6PRD1 2367 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 CHD5Q8TDI0 1954 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 LATO43561 262 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 STK10O94804 968 aaKnown RBP14.8□□□□□ -0.04
LIMS1-206ENST00000414829 SYPP08247 313 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-206ENST00000414829 PEX5P50542 639 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 AFF3P51826 1226 aaKnown RBP14.8□□□□□ -0.04
LIMS1-206ENST00000414829 RPS21P63220 83 aaKnown RBP14.8□□□□□ -0.04
LIMS1-206ENST00000414829 SPEM2Q0P670 501 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 AP1B1Q10567 949 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 NDUFAF2Q8N183 169 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 ALG3Q92685 438 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 BIRC7Q96CA5 298 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 FEM1CQ96JP0 617 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 RBM22Q9NW64 420 aaKnown RBP eCLIP14.8□□□□□ -0.04
LIMS1-206ENST00000414829 VPS13AQ96RL7 3174 aa14.8□□□□□ -0.04
LIMS1-206ENST00000414829 A0A1W2PPC4 97 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 UPK3BL1B0FP48 263 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 UPK3BL2E5RIL1 263 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 BCAT2O15382 392 aaPredicted RBP14.79□□□□□ -0.04
LIMS1-206ENST00000414829 INSIG1O15503 277 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 MAGEC1O60732 1142 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 RNGTTO60942 597 aaKnown RBP14.79□□□□□ -0.04
LIMS1-206ENST00000414829 PCDH8O95206 1070 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 CFIP05156 583 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 SERPINF2P08697 491 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 CR2P20023 1033 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 GRIA4P48058 902 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 METAP1P53582 386 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 RACK1P63244 317 aaKnown RBP14.79□□□□□ -0.04
LIMS1-206ENST00000414829 ARHGAP8P85298 464 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 ITKQ08881 620 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 OVGP1Q12889 678 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 SLC10A2Q12908 348 aaPredicted RBP14.79□□□□□ -0.04
LIMS1-206ENST00000414829 PRKD1Q15139 912 aaPredicted RBP14.79□□□□□ -0.04
LIMS1-206ENST00000414829 RPS6KA1Q15418 735 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 AASDHQ4L235 1098 aaPredicted RBP14.79□□□□□ -0.04
LIMS1-206ENST00000414829 SLC23A3Q6PIS1 610 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 IL27RAQ6UWB1 636 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 PRR23CQ6ZRP0 262 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 TTC7BQ86TV6 843 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 HORMAD1Q86X24 394 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 CDKL3Q8IVW4 592 aaPredicted RBP14.79□□□□□ -0.04
LIMS1-206ENST00000414829 NETO2Q8NC67 525 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 FAM174AQ8TBP5 190 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 PPP1R2P1Q96PQ5 205 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 LGMNQ99538 433 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 FRMD8P1Q9BZ68 369 aaPredicted RBP14.79□□□□□ -0.04
LIMS1-206ENST00000414829 MIR1-1HGQ9H1L0 117 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 CARD9Q9H257 536 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 NT5MQ9NPB1 228 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 DNPEPQ9ULA0 475 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 SLC6A14Q9UN76 642 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 TTLL3Q9Y4R7 772 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 FADS3Q9Y5Q0 445 aa14.79□□□□□ -0.04
LIMS1-206ENST00000414829 MYO15AQ9UKN7 3530 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 MAP3K6O95382 1288 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 PIGNO95427 931 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 IGHV4-34P06331 123 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 AKT2P31751 481 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 GKP32189 559 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 TNNT3P45378 269 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-206ENST00000414829 ATXN3P54252 364 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-206ENST00000414829 RPL26P61254 145 aaKnown RBP14.78□□□□□ -0.04
LIMS1-206ENST00000414829 NOMO1Q15155 1222 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 SLC14A2Q15849 920 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 TRIM61Q5EBN2 209 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 NAPEPLDQ6IQ20 393 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 USP45Q70EL2 814 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 ADAT2Q7Z6V5 191 aaKnown RBP14.78□□□□□ -0.04
LIMS1-206ENST00000414829 DEFB119Q8N690 84 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 ECHDC3Q96DC8 303 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 QKIQ96PU8 341 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIMS1-206ENST00000414829 IL12RB2Q99665 862 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 EIF2B4Q9UI10 523 aaKnown RBP14.78□□□□□ -0.04
LIMS1-206ENST00000414829 RPL26L1Q9UNX3 145 aaKnown RBP14.78□□□□□ -0.04
LIMS1-206ENST00000414829 ATP8A1Q9Y2Q0 1164 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 OTOGLQ3ZCN5 2332 aa14.78□□□□□ -0.04
LIMS1-206ENST00000414829 ATXN2Q99700 1313 aaKnown RBP14.77□□□□□ -0.04
LIMS1-206ENST00000414829 A0A0U1RQJ8 604 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 CFAP69A5D8W1 941 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 C10orf142B7Z368 130 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 PRAMEF26H0Y7S4 382 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 KCNK1O00180 336 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 AREL1O15033 823 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 MUSKO15146 869 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 DDX3YO15523 660 aaKnown RBP14.77□□□□□ -0.05
LIMS1-206ENST00000414829 HTRA2O43464 458 aaPredicted RBP14.77□□□□□ -0.05
LIMS1-206ENST00000414829 KIF5CO60282 957 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 CPP00450 1065 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 PYGMP11217 842 aa14.77□□□□□ -0.05
LIMS1-206ENST00000414829 RGRP47804 291 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms