RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 PSMG1O95456 288 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 CCDC166P0CW27 439 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 TPP2P29144 1249 aaPredicted RBP9.52□□□□□ -0.89
SNHG3-201ENST00000413987 LSSP48449 732 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 PSEN2P49810 448 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 CCR9P51686 369 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 BLVRAP53004 296 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 ACTR1AP61163 376 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 DLG4P78352 724 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 KCNA10Q16322 511 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 FBXO48Q5FWF7 155 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 FAM47CQ5HY64 1035 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 SH3PXD2AQ5TCZ1 1133 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 FYB2Q5VWT5 728 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 TTC27Q6P3X3 843 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 TSPYL5Q86VY4 417 aaPredicted RBP9.52□□□□□ -0.89
SNHG3-201ENST00000413987 LNX1Q8TBB1 728 aaPredicted RBP9.52□□□□□ -0.89
SNHG3-201ENST00000413987 ALG3Q92685 438 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 ARL5BQ96KC2 179 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 TTC25Q96NG3 672 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 ACCSQ96QU6 501 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 USB1Q9BQ65 265 aaKnown RBP9.52□□□□□ -0.89
SNHG3-201ENST00000413987 ZSWIM1Q9BR11 485 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 FDXACB1Q9BRP7 624 aaPredicted RBP9.52□□□□□ -0.89
SNHG3-201ENST00000413987 BTBD10Q9BSF8 475 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 STK33Q9BYT3 514 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 MTMR12Q9C0I1 747 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 POLMQ9NP87 494 aaPredicted RBP9.52□□□□□ -0.89
SNHG3-201ENST00000413987 SENP1Q9P0U3 644 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 KAT6AQ92794 2004 aa9.52□□□□□ -0.89
SNHG3-201ENST00000413987 PRPF4O43172 522 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 SLC25A17O43808 307 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 EXOC3O60645 756 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 LRRN2O75325 713 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 TMEM63AO94886 807 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 LYNP07948 512 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 CFHP08603 1231 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 GRK4P32298 578 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 THPOP40225 353 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 NAMPTP43490 491 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 RPS26P62854 115 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 MC1RQ01726 317 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 PDK4Q16654 411 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 LIN52Q52LA3 116 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 UBAP2Q5T6F2 1119 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 TCERG1LQ5VWI1 586 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 DENND5BQ6ZUT9 1274 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 NLRC3Q7RTR2 1065 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 CAND1Q86VP6 1230 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 DNAAF5Q86Y56 855 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 CBWD2Q8IUF1 395 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 CCNJLQ8IV13 435 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 SRRM1Q8IYB3 904 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 ST13P4Q8IZP2 240 aaPredicted RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 C10orf82Q8WW14 230 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 DNAJB3Q8WWF6 145 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 WNT8BQ93098 351 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 MVB12AQ96EY5 273 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 FEM1CQ96JP0 617 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 CMTM3Q96MX0 182 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 TBCDQ9BTW9 1192 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 MIR1-1HGQ9H1L0 117 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 LRRC19Q9H756 370 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 MID1IP1Q9NPA3 183 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 SIX2Q9NPC8 291 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 EIF2B3Q9NR50 452 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 DZANK1Q9NVP4 752 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 GALNT8Q9NY28 637 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 NINJ2Q9NZG7 142 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 NAALADL1Q9UQQ1 740 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 K7ERI5 159 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 TAF4O00268 1085 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 EREGO14944 169 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 AKT1P31749 480 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 MLH1P40692 756 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 ACAA2P42765 397 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 ACOT2P49753 483 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 CDK7P50613 346 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 RAD23AP54725 363 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 NLRP11P59045 1033 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 KCNJ10P78508 379 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 CAMK2DQ13557 499 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 KYNUQ16719 465 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 TAF1BQ53T94 588 aaPredicted RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 ZNF484Q5JVG2 852 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 IER5Q5VY09 327 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 RHBDF2Q6PJF5 856 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 UNC5AQ6ZN44 842 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 STXBP4Q6ZWJ1 553 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 SLC13A5Q86YT5 568 aaPredicted RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 TMEM130Q8N3G9 435 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 LINC01465Q8N7H1 131 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 DNAJC5GQ8N7S2 189 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 ZBTB8BQ8NAP8 495 aaPredicted RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 PLEKHO2Q8TD55 490 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 DEPDC1BQ8WUY9 529 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 SLC5A11Q8WWX8 675 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 SNF8Q96H20 258 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 MAGEB10Q96LZ2 347 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms