RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 GADD45BO75293 160 aaPredicted RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 POP4O95707 220 aaKnown RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 LSM8O95777 96 aaKnown RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 ANXA6P08133 673 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 RHOQP17081 205 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 EIF4A3P38919 411 aaKnown RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 GEMIN4P57678 1058 aaKnown RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 SNRPD1P62314 119 aaKnown RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 PPARDQ03181 441 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 EIF3IQ13347 325 aaKnown RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 SPIDRQ14159 915 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 FAM72AQ5TYM5 149 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 FAM72DQ6L9T8 149 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 LVRNQ6Q4G3 990 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 FAM72BQ86X60 149 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 FSTL5Q8N475 847 aaPredicted RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 KYQ8NBH2 561 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 EPAS1Q99814 870 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 NAA15Q9BXJ9 866 aaKnown RBP12.32□□□□□ -0.44
LIMS2-210ENST00000413578 MAGEH1Q9H213 219 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 OR12D3Q9UGF7 316 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 DOCK4Q8N1I0 1966 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 GOLGA8SH3BPF8 625 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 KRIT1O00522 736 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 SLC28A2O43868 658 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 TM7SF2O76062 418 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 LRIG2O94898 1065 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 TIMP2P16035 220 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 ITGB6P18564 788 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 ITIH2P19823 946 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 SLC5A2P31639 672 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 CCKBRP32239 447 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 ADRA1BP35368 520 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 UGT1A5P35504 534 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 HK3P52790 923 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 NOMO3P69849 1222 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 KCNC4Q03721 635 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 IRF4Q15306 451 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 KLHL40Q2TBA0 621 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 LRRC73Q5JTD7 316 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 MIIPQ5JXC2 388 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 ATXN7L2Q5T6C5 722 aaPredicted RBP12.31□□□□□ -0.44
LIMS2-210ENST00000413578 ESRP1Q6NXG1 681 aaKnown RBP12.31□□□□□ -0.44
LIMS2-210ENST00000413578 FOXR1Q6PIV2 292 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 NOP9Q86U38 636 aaKnown RBP12.31□□□□□ -0.44
LIMS2-210ENST00000413578 EMC1Q8N766 993 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 PCDH19Q8TAB3 1148 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 CCDC74AQ96AQ1 378 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 MAGEB5Q9BZ81 275 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 EDEM3Q9BZQ6 932 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 NOL6Q9H6R4 1146 aaKnown RBP12.31□□□□□ -0.44
LIMS2-210ENST00000413578 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 DNAI1Q9UI46 699 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 MFHAS1Q9Y4C4 1052 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 UBR5O95071 2799 aaPredicted RBP12.31□□□□□ -0.44
LIMS2-210ENST00000413578 KIF26BQ2KJY2 2108 aa12.31□□□□□ -0.44
LIMS2-210ENST00000413578 FAM170AA1A519 330 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 TSPAN11A1L157 253 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 TERTO14746 1132 aaKnown RBP12.3□□□□□ -0.44
LIMS2-210ENST00000413578 KDELR3O43731 214 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 RAMP2O60895 175 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 TMCC1O94876 653 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 PEX5P50542 639 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 BLKP51451 505 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 ATP11AP98196 1134 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 POLD3Q15054 466 aaPredicted RBP12.3□□□□□ -0.44
LIMS2-210ENST00000413578 AGERQ15109 404 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 ELOCQ15369 112 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 TGIF1Q15583 401 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 MAN2A1Q16706 1144 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 ALG11Q2TAA5 492 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 WSCD2Q2TBF2 565 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 TMEM52BQ4KMG9 183 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 FAXCQ5TGI0 409 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 KCTD16Q68DU8 428 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 XKR5Q6UX68 686 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 GDPD4Q6W3E5 623 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 LEKR1Q6ZMV7 388 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 RAB11FIP2Q7L804 512 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 TTC7BQ86TV6 843 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 SDR16C5Q8N3Y7 309 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 RYBPQ8N488 228 aaPredicted RBP12.3□□□□□ -0.44
LIMS2-210ENST00000413578 FBXO39Q8N4B4 442 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 GPR156Q8NFN8 814 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 CENPIQ92674 756 aaPredicted RBP12.3□□□□□ -0.44
LIMS2-210ENST00000413578 GFM1Q96RP9 751 aaKnown RBP12.3□□□□□ -0.44
LIMS2-210ENST00000413578 C1QTNF7Q9BXJ2 289 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 TTYH3Q9C0H2 523 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 NDST4Q9H3R1 872 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 STARD5Q9NSY2 213 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 FHOD1Q9Y613 1164 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 CHD5Q8TDI0 1954 aa12.3□□□□□ -0.44
LIMS2-210ENST00000413578 C2CD4BA6NLJ0 364 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 TMX2-CTNND1H3BSU7 103 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 NVLO15381 856 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms