RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 UGP2Q16851 508 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TMEM259Q4ZIN3 620 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 RAB6CQ53S08 254 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 ANKRD20A8PQ5CZ79 823 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 CFAP58Q5T655 872 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 ABI3BPQ7Z7G0 1075 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 RCOR2Q8IZ40 523 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 GALNT15Q8N3T1 639 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 ZCCHC9Q8N567 271 aaKnown RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 DEFB119Q8N690 84 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TEX26Q8N6G2 289 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TC2NQ8N9U0 490 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 SNX19Q92543 992 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 FAF2Q96CS3 445 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 ECHDC3Q96DC8 303 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 HMCESQ96FZ2 354 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 ZNF830Q96NB3 372 aaPredicted RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 KLHL32Q96NJ5 620 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 CSPG4P5Q96PW8 444 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 RNF157Q96PX1 679 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 NUDCD1Q96RS6 583 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 CHP1Q99653 195 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 ORAI3Q9BRQ5 295 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 DUSP23Q9BVJ7 150 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 CINPQ9BW66 212 aaPredicted RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 RAB6CQ9H0N0 254 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 MTG2Q9H4K7 406 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 PCDH18Q9HCL0 1135 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 RXFP3Q9NSD7 469 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP54-202ENST00000413442 KLHL11Q9NVR0 708 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 PHTF1Q9UMS5 762 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 FCF1Q9Y324 198 aaKnown RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 SNX10Q9Y5X0 201 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 EPN1Q9Y6I3 576 aaPredicted RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 GON4LQ3T8J9 2241 aa6.46□□□□□ -1.37
USP54-202ENST00000413442 A0A1B0GVT2 93 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 RGSL1A5PLK6 1076 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 TMEM8BA6NDV4 472 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 H3BM21 787 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 PSTPIP1O43586 416 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 NRDCO43847 1150 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 MAFKO60675 156 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 ZRANB2O95218 330 aaKnown RBP eCLIP6.46□□□□□ -1.38
USP54-202ENST00000413442 ITGAVP06756 1048 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 ALPPL2P10696 532 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 CYP2A6P11509 494 aaPredicted RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 AMPD1P23109 780 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 KELP23276 732 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 GLDCP23378 1020 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 KDELR1P24390 212 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 IL4RP24394 825 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 IL1R2P27930 398 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 HTR1BP28222 390 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 TEAD1P28347 426 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 GARSP41250 739 aaKnown RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 SSR1P43307 286 aaKnown RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 DUSP3P51452 185 aaPredicted RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 ZNF75DP51815 510 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 E2F1Q01094 437 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 GALNT2Q10471 571 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 ZNF235Q14590 738 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 MESDQ14696 234 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 PDK1Q15118 436 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 SLC14A2Q15849 920 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 KIF19Q2TAC6 998 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 ZNF284Q2VY69 593 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 UAP1L1Q3KQV9 507 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 KCNT1Q5JUK3 1230 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 N4BP2L1Q5TBK1 243 aaPredicted RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 ALG1LQ6GMV1 187 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 TCEAL6Q6IPX3 200 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 LVRNQ6Q4G3 990 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 KYAT3Q6YP21 454 aaKnown RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 NAXDQ8IW45 347 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 ARHGAP12Q8IWW6 846 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 SYCE1Q8N0S2 351 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 ATPAF2Q8N5M1 289 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 RNF10Q8N5U6 811 aaKnown RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 TMEM145Q8NBT3 493 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 CHST14Q8NCH0 376 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 RNF214Q8ND24 703 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 CXorf40AQ8TE69 158 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 RHBDD1Q8TEB9 315 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 MAML1Q92585 1016 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 HSPH1Q92598 858 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 GLMNQ92990 594 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 TCEAL3Q969E4 200 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 ARRDC3Q96B67 414 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 GRAMD1AQ96CP6 724 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 HDAC11Q96DB2 347 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 SCRN2Q96FV2 425 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 PPP1R2P1Q96PQ5 205 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 PEBP4Q96S96 227 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 KCTD15Q96SI1 283 aaPredicted RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 VAT1Q99536 393 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 POLR1EQ9GZS1 481 aaKnown RBP6.46□□□□□ -1.38
USP54-202ENST00000413442 CDH19Q9H159 772 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 TNKS2Q9H2K2 1166 aa6.46□□□□□ -1.38
USP54-202ENST00000413442 ZDHHC6Q9H6R6 413 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms