RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DTLQ9NZJ0 730 aa11.04□□□□□ -0.64
CHMP3-205ENST00000409810 AMACRQ9UHK6 382 aa11.04□□□□□ -0.64
CHMP3-205ENST00000409810 DMTF1Q9Y222 760 aa11.04□□□□□ -0.64
CHMP3-205ENST00000409810 PCDHA3Q9Y5H8 950 aa11.04□□□□□ -0.64
CHMP3-205ENST00000409810 HEY1Q9Y5J3 304 aa11.04□□□□□ -0.64
CHMP3-205ENST00000409810 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.04□□□□□ -0.64
CHMP3-205ENST00000409810 PCDH15Q96QU1 1955 aa11.04□□□□□ -0.64
CHMP3-205ENST00000409810 KNL1Q8NG31 2342 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 hCG_1818297A0A087WSY0 165 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 A0A1W2PQ67 120 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 MIF4GDA9UHW6 222 aaKnown RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 NEMP1O14524 444 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 MATN3O15232 486 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 INSIG1O15503 277 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 LATO43561 262 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 TSPAN6O43657 245 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 CST8O60676 142 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 MAP3K6O95382 1288 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 PIGNO95427 931 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 PEX11BO96011 259 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 IGHV4-34P06331 123 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 PTMAP06454 111 aaKnown RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 NFKBIAP25963 317 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 MAOBP27338 520 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 AFF3P51826 1226 aaKnown RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 DYNLT1P63172 113 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 PPIDQ08752 370 aaKnown RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 ELP6Q0PNE2 266 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 TAZQ16635 292 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 SLC45A4Q5BKX6 768 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 KAZNQ674X7 775 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 IL27RAQ6UWB1 636 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 ZNF662Q6ZS27 426 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 ADAT2Q7Z6V5 191 aaKnown RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 LRRC57Q8N9N7 239 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 MAML1Q92585 1016 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 KRT35Q92764 455 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 P3H4Q92791 437 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 TCEAL3Q969E4 200 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 ALS2CR12Q96Q35 445 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 NUDCD1Q96RS6 583 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 ZDHHC5Q9C0B5 715 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 POLR1EQ9GZS1 481 aaKnown RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 SMOC1Q9H4F8 434 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 CAPN10Q9HC96 672 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 TRIM10Q9UDY6 481 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 CDV3Q9UKY7 258 aaKnown RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 FADS3Q9Y5Q0 445 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 CEP250Q9BV73 2442 aa11.03□□□□□ -0.64
CHMP3-205ENST00000409810 ASCC3Q8N3C0 2202 aaKnown RBP11.03□□□□□ -0.64
CHMP3-205ENST00000409810 LRRK1Q38SD2 2015 aa11.02□□□□□ -0.64
CHMP3-205ENST00000409810 TMEM131Q92545 1883 aa11.02□□□□□ -0.64
CHMP3-205ENST00000409810 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-205ENST00000409810 LNP1A1A4G5 178 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 TSPAN11A1L157 253 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 PATE3B3GLJ2 98 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 RNGTTO60942 597 aaKnown RBP11.02□□□□□ -0.65
CHMP3-205ENST00000409810 SOCS5O75159 536 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 CCNB1P14635 433 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 CA4P22748 312 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 CES1P23141 567 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 PTPN7P35236 360 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 RGRP47804 291 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 GRIA4P48058 902 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 MARCKSL1P49006 195 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 LIMK1P53667 647 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 C21orf59P57076 290 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 TAS2R38P59533 333 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 PPP2CBP62714 309 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 POLR2LP62875 67 aaKnown RBP11.02□□□□□ -0.65
CHMP3-205ENST00000409810 RPS21P63220 83 aaKnown RBP11.02□□□□□ -0.65
CHMP3-205ENST00000409810 RACK1P63244 317 aaKnown RBP11.02□□□□□ -0.65
CHMP3-205ENST00000409810 PPP2CAP67775 309 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 IRX4P78413 519 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 CCZ1BP86790 482 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 CCZ1P86791 482 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-205ENST00000409810 ITKQ08881 620 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 AP1B1Q10567 949 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 SLC10A2Q12908 348 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-205ENST00000409810 CCDC181Q5TID7 509 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 ERAP2Q6P179 960 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 TTC7BQ86TV6 843 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 NT5DC3Q86UY8 548 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 HORMAD1Q86X24 394 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 TEX26Q8N6G2 289 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 FEM1CQ96JP0 617 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 FERMT1Q9BQL6 677 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 NT5MQ9NPB1 228 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 TMEM9BQ9NQ34 198 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 AASDHPPTQ9NRN7 309 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 RBM22Q9NW64 420 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHMP3-205ENST00000409810 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 EFR3BQ9Y2G0 817 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 TTLL3Q9Y4R7 772 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 CABIN1Q9Y6J0 2220 aa11.02□□□□□ -0.65
CHMP3-205ENST00000409810 DMXL1Q9Y485 3027 aa11.01□□□□□ -0.65
CHMP3-205ENST00000409810 A0A1W2PQU0 124 aa11.01□□□□□ -0.65
CHMP3-205ENST00000409810 UPK3BL1B0FP48 263 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms