RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CCDC15Q0P6D6 951 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 ZBTB17Q13105 803 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 IHHQ14623 411 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 PRKD1Q15139 912 aaPredicted RBP22.61■■□□□ 1.21
PTCD3-203ENST00000409783 CSRP2Q16527 193 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 WDR45BQ5MNZ6 344 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 SYCP2LQ5T4T6 812 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 MEI1Q5TIA1 1274 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 B4GALNT4Q76KP1 1039 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 ZSWIM9Q86XI8 627 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 BBS5Q8N3I7 341 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 HCAR2Q8TDS4 363 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 ECHDC3Q96DC8 303 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 ZNF641Q96N77 438 aaPredicted RBP22.61■■□□□ 1.21
PTCD3-203ENST00000409783 HINFPQ9BQA5 517 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 BRD8Q9H0E9 1235 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 NOD2Q9HC29 1040 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 PREBQ9HCU5 417 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 RBM22Q9NW64 420 aaKnown RBP eCLIP22.61■■□□□ 1.21
PTCD3-203ENST00000409783 AMACRQ9UHK6 382 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 EIF2B4Q9UI10 523 aaKnown RBP22.61■■□□□ 1.21
PTCD3-203ENST00000409783 FADS3Q9Y5Q0 445 aa22.61■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3DA0A087WVF3 549 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3IA0A087WXS9 549 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3EA0A087X179 549 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3KA0A087X1G2 549 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3FA6NER0 549 aaPredicted RBP22.6■■□□□ 1.21
PTCD3-203ENST00000409783 PATE3B3GLJ2 98 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3LB9A6J9 549 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 APOC4-APOC2K7ER74 178 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 PPP1R12AO14974 1030 aaPredicted RBP22.6■■□□□ 1.21
PTCD3-203ENST00000409783 AREL1O15033 823 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 AP1G1O43747 822 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 APOC2P02655 101 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 HLA-DQB2P05538 268 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3HP0C7X1 549 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TIMP2P16035 220 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 DPP6P42658 865 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 MAPK8P45983 427 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 RALGPS1Q5JS13 557 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 FAM182AQ5T1J6 154 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3GQ6DHY5 549 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3CQ6IPX1 549 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 FBXL19Q6PCT2 694 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 BZW1Q7L1Q6 419 aaKnown RBP22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TRIM69Q86WT6 500 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 RGL4Q8IZJ4 473 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TBC1D3Q8IZP1 549 aaPredicted RBP22.6■■□□□ 1.21
PTCD3-203ENST00000409783 CNTD1Q8N815 330 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 P3H4Q92791 437 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 HAUS1Q96CS2 278 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 ATP13A3Q9H7F0 1226 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 VPS45Q9NRW7 570 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 ATP8A1Q9Y2Q0 1164 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 TRPM6Q9BX84 2022 aa22.6■■□□□ 1.21
PTCD3-203ENST00000409783 CACNA1EQ15878 2313 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 JCHAINP01591 159 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 AP1B1Q10567 949 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 NOMO1Q15155 1222 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 SF3A2Q15428 464 aaKnown RBP22.59■■□□□ 1.21
PTCD3-203ENST00000409783 TCEAL6Q6IPX3 200 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 NEK5Q6P3R8 708 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 ARRDC2Q8TBH0 407 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 SPOCK2Q92563 424 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 TCEAL3Q969E4 200 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 RAB7BQ96AH8 199 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 SCUBE2Q9NQ36 999 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 GGT7Q9UJ14 662 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 ZFR2Q9UPR6 939 aaKnown RBP22.59■■□□□ 1.21
PTCD3-203ENST00000409783 PCDH15Q96QU1 1955 aa22.59■■□□□ 1.21
PTCD3-203ENST00000409783 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.58■■□□□ 1.21
PTCD3-203ENST00000409783 A0A1W2PPC4 97 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 HTRA2O43464 458 aaPredicted RBP22.58■■□□□ 1.21
PTCD3-203ENST00000409783 ITIH2P19823 946 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 CD27P26842 260 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 SERPINA4P29622 427 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 CETN2P41208 172 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 BCL2L1Q07817 233 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 NIPAL4Q0D2K0 466 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 KLF1Q13351 362 aaPredicted RBP22.58■■□□□ 1.21
PTCD3-203ENST00000409783 LRRC73Q5JTD7 316 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 TRIM58Q8NG06 486 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 ACTL9Q8TC94 416 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 SNX19Q92543 992 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 ALS2CR12Q96Q35 445 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 SEMA3CQ99985 751 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 POLR1EQ9GZS1 481 aaKnown RBP22.58■■□□□ 1.21
PTCD3-203ENST00000409783 ITM2BQ9Y287 266 aa22.58■■□□□ 1.21
PTCD3-203ENST00000409783 ADAMTS9Q9P2N4 1935 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 LRRK1Q38SD2 2015 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 RNGTTO60942 597 aaKnown RBP22.57■■□□□ 1.2
PTCD3-203ENST00000409783 DSC2Q02487 901 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 CCDC173Q0VFZ6 552 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 TRAF2Q12933 501 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 UGP2Q16851 508 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 DUOXA1Q1HG43 343 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 TMEM259Q4ZIN3 620 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 SLC23A3Q6PIS1 610 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 BRAT1Q6PJG6 821 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 PRR23CQ6ZRP0 262 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms