RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ZNF805Q5CZA5 627 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 C4orf22Q6V702 233 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 USP30Q70CQ3 517 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 PRPF39Q86UA1 669 aaKnown RBP16.79■□□□□ 0.28
SUMO1-208ENST00000409627 CACUL1Q86Y37 369 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 CAMK1DQ8IU85 385 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 PGBD3Q8N328 593 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.79■□□□□ 0.28
SUMO1-208ENST00000409627 GLIS1Q8NBF1 620 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 SPOCK2Q92563 424 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 ARRDC3Q96B67 414 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 ECHDC3Q96DC8 303 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 KLHL32Q96NJ5 620 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 RBM15Q96T37 977 aaKnown RBP eCLIP16.79■□□□□ 0.28
SUMO1-208ENST00000409627 SUV39H2Q9H5I1 410 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 PCDH9Q9HC56 1237 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 VPS45Q9NRW7 570 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 USP36Q9P275 1121 aaKnown RBP16.79■□□□□ 0.28
SUMO1-208ENST00000409627 DKK3Q9UBP4 350 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 NEU2Q9Y3R4 380 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 A0A1W2PQ67 120 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 DLL1O00548 723 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 ANXA9O76027 345 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 ECEL1O95672 775 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 ACADMP11310 421 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 ETS1P14921 441 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 PSMB4P28070 264 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 DRD3P35462 400 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 METAP1P53582 386 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 C2orf54Q08AI8 447 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 TRAF2Q12933 501 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 PRPSAP1Q14558 356 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
SUMO1-208ENST00000409627 BRAT1Q6PJG6 821 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 KBTBD6Q86V97 674 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 KLHL7Q8IXQ5 586 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 KLHDC8BQ8IXV7 354 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 AADATQ8N5Z0 425 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 SPATA22Q8NHS9 363 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 FAM131CQ96AQ9 280 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 OXNAD1Q96HP4 312 aaPredicted RBP16.78■□□□□ 0.28
SUMO1-208ENST00000409627 GORASP1Q9BQQ3 440 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 LRFN3Q9BTN0 628 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 TDRD1Q9BXT4 1180 aaKnown RBP16.78■□□□□ 0.28
SUMO1-208ENST00000409627 HDAC8Q9BY41 377 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 ITM2CQ9NQX7 267 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 DYRK4Q9NR20 520 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 FAM153AQ9UHL3 310 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 PCDHGC4Q9Y5F7 938 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 RAI2Q9Y5P3 530 aa16.78■□□□□ 0.28
SUMO1-208ENST00000409627 AXIN1O15169 862 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 GALR2O43603 387 aaPredicted RBP16.77■□□□□ 0.28
SUMO1-208ENST00000409627 FZD6O60353 706 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 ZNF217O75362 1048 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 METTL18O95568 372 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 MT-CYBP00156 380 aaPredicted RBP16.77■□□□□ 0.28
SUMO1-208ENST00000409627 IGLV3-19P01714 112 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 KRT14P02533 472 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 ZSCAN5DPP0CG00 497 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 RPL22P35268 128 aaKnown RBP16.77■□□□□ 0.28
SUMO1-208ENST00000409627 FDFT1P37268 417 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 GEMP55040 296 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 CSTF1Q05048 431 aaKnown RBP16.77■□□□□ 0.28
SUMO1-208ENST00000409627 CCDC15Q0P6D6 951 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 MPP3Q13368 585 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 DHX34Q14147 1143 aaKnown RBP16.77■□□□□ 0.28
SUMO1-208ENST00000409627 POM121L1PQ3SYA9 428 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 TSSK4Q6SA08 328 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 KDELC1Q6UW63 502 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 PARS2Q7L3T8 475 aaKnown RBP16.77■□□□□ 0.28
SUMO1-208ENST00000409627 PRUNE1Q86TP1 453 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 WDR5BQ86VZ2 330 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 MNS1Q8NEH6 495 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 FAM126AQ9BYI3 521 aaPredicted RBP16.77■□□□□ 0.28
SUMO1-208ENST00000409627 TPSD1Q9BZJ3 242 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 FBXL12Q9NXK8 326 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 FZD4Q9ULV1 537 aa16.77■□□□□ 0.28
SUMO1-208ENST00000409627 AAR2Q9Y312 384 aaKnown RBP16.77■□□□□ 0.28
SUMO1-208ENST00000409627 ZNF318Q5VUA4 2279 aa16.77■□□□□ 0.27
SUMO1-208ENST00000409627 A0A1W2PP55 124 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 GOLGA6CA6NDK9 693 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 GOLGA6BA6NDN3 693 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 C16orf96A6NNT2 1141 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 F5H423 210 aaPredicted RBP16.76■□□□□ 0.27
SUMO1-208ENST00000409627 SLC7A4O43246 635 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 PGLSO95336 258 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 GOLGA6DP0CG33 693 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 PTGIRP43119 386 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 PXNP49023 591 aaPredicted RBP16.76■□□□□ 0.27
SUMO1-208ENST00000409627 TPMTP51580 245 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 SUOXP51687 545 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 NEK3P51956 506 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 DR1Q01658 176 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 DMWDQ09019 674 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 CNTN1Q12860 1018 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 ANGPT1Q15389 498 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 ZNF528Q3MIS6 628 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 CFAP58Q5T655 872 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 ARMC12Q5T9G4 340 aa16.76■□□□□ 0.27
SUMO1-208ENST00000409627 SYDE1Q6ZW31 735 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms