RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 PLCB1Q9NQ66 1216 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 MBNL1Q9NR56 388 aaKnown RBP17.14■□□□□ 0.33
SCRN1-203ENST00000409570 SIRPGQ9P1W8 387 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 AJAP1Q9UKB5 411 aaPredicted RBP17.14■□□□□ 0.33
SCRN1-203ENST00000409570 PAXBP1Q9Y5B6 917 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 SDK2Q58EX2 2172 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 TMX2-CTNND1H3BSU7 103 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 SUV39H1O43463 412 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 MMP20O60882 483 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 UGT2B4P06133 528 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 LIPCP11150 499 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 CCKBRP32239 447 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 CLCN1P35523 988 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 KRT9P35527 623 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 INHBCP55103 352 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 PTK2Q05397 1052 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 MORC3Q14149 939 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 LRRC73Q5JTD7 316 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 COLEC12Q5KU26 742 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 TRNP1Q6NT89 227 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 BNIPLQ7Z465 357 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 SLC47A2Q86VL8 602 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
SCRN1-203ENST00000409570 FSTL5Q8N475 847 aaPredicted RBP17.13■□□□□ 0.33
SCRN1-203ENST00000409570 PCDH19Q8TAB3 1148 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 ARHGEF26Q96DR7 871 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 KLHL32Q96NJ5 620 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 STRADBQ9C0K7 418 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 DOLKQ9UPQ8 538 aa17.13■□□□□ 0.33
SCRN1-203ENST00000409570 CXorf51AA0A1B0GTR3 108 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 GOLGA6L4A6NEF3 574 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 KRIT1O00522 736 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 TOR1BO14657 336 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 NVLO15381 856 aaKnown RBP17.12■□□□□ 0.33
SCRN1-203ENST00000409570 TM7SF2O76062 418 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 GSRP00390 522 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 RPLP0P05388 317 aaKnown RBP17.12■□□□□ 0.33
SCRN1-203ENST00000409570 FAM87AP0C7U9 286 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 FLT3P36888 993 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 SCNN1AP37088 669 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 PAK1Q13153 545 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 ELOCQ15369 112 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 LVRNQ6Q4G3 990 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 OR2AP1Q8NGE2 309 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 ARHGEF2Q92974 986 aaKnown RBP17.12■□□□□ 0.33
SCRN1-203ENST00000409570 EPAS1Q99814 870 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 SEMA3CQ99985 751 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 CPEB1Q9BZB8 566 aaKnown RBP17.12■□□□□ 0.33
SCRN1-203ENST00000409570 LRRN3Q9H3W5 708 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 NDFIP2Q9NV92 336 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 TMEM51Q9NW97 253 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 PPARGC1AQ9UBK2 798 aaKnown RBP17.12■□□□□ 0.33
SCRN1-203ENST00000409570 PISDQ9UG56 409 aa17.12■□□□□ 0.33
SCRN1-203ENST00000409570 ZFC3H1O60293 1989 aaKnown RBP17.11■□□□□ 0.33
SCRN1-203ENST00000409570 LRRK2Q5S007 2527 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 POP4O95707 220 aaKnown RBP17.11■□□□□ 0.33
SCRN1-203ENST00000409570 PNMA6AP0CW24 399 aaPredicted RBP17.11■□□□□ 0.33
SCRN1-203ENST00000409570 ITIH2P19823 946 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 CDH5P33151 784 aaPredicted RBP17.11■□□□□ 0.33
SCRN1-203ENST00000409570 GABRB2P47870 512 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 BLKP51451 505 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 HK3P52790 923 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 SNRPD1P62314 119 aaKnown RBP17.11■□□□□ 0.33
SCRN1-203ENST00000409570 IRF4Q15306 451 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 TCEA2Q15560 299 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 KLHL40Q2TBA0 621 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 MYLK3Q32MK0 819 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 FAM102AQ5T9C2 384 aaPredicted RBP17.11■□□□□ 0.33
SCRN1-203ENST00000409570 GBP6Q6ZN66 633 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 NYAP1Q6ZVC0 841 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 TTC7BQ86TV6 843 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 FAM131BQ86XD5 332 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 XYLT1Q86Y38 959 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 HID1Q8IV36 788 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 SCG3Q8WXD2 468 aaKnown RBP17.11■□□□□ 0.33
SCRN1-203ENST00000409570 TSACCQ96A04 125 aaPredicted RBP17.11■□□□□ 0.33
SCRN1-203ENST00000409570 TMEM74Q96NL1 305 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 C1QTNF7Q9BXJ2 289 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 OSBPL1AQ9BXW6 950 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 EDEM3Q9BZQ6 932 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 GPR34Q9UPC5 381 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 LOXL2Q9Y4K0 774 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 PCDHGA4Q9Y5G9 962 aa17.11■□□□□ 0.33
SCRN1-203ENST00000409570 FOXN3O00409 490 aaPredicted RBP17.1■□□□□ 0.33
SCRN1-203ENST00000409570 BIN1O00499 593 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 ALPIP09923 528 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 JMJD7P0C870 316 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 CTSEP14091 401 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 WT1P19544 449 aaPredicted RBP17.1■□□□□ 0.33
SCRN1-203ENST00000409570 ITIH1P19827 911 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 PON1P27169 355 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 ETV5P41161 510 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 POLD3Q15054 466 aaPredicted RBP17.1■□□□□ 0.33
SCRN1-203ENST00000409570 TBR1Q16650 682 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 EXOC3L4Q17RC7 722 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 ALG11Q2TAA5 492 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 MANEAQ5SRI9 462 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 ATXN7L2Q5T6C5 722 aaPredicted RBP17.1■□□□□ 0.33
SCRN1-203ENST00000409570 SMYD5Q6GMV2 418 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 GDPD4Q6W3E5 623 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms