RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 A0A1B0GTW7 788 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 LNP1A1A4G5 178 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 PATE3B3GLJ2 98 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 FGGP02679 453 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 SERPINF2P08697 491 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 CCR5P51681 352 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 NEK3P51956 506 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 LONRF2Q1L5Z9 754 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 ATXN7L2Q5T6C5 722 aaPredicted RBP21.05■□□□□ 0.96
C4orf48-201ENST00000409248 TMCO4Q5TGY1 634 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 TIGD7Q6NT04 549 aaPredicted RBP21.05■□□□□ 0.96
C4orf48-201ENST00000409248 ARHGAP36Q6ZRI8 547 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 ERN2Q76MJ5 926 aaKnown RBP21.05■□□□□ 0.96
C4orf48-201ENST00000409248 ZCCHC9Q8N567 271 aaKnown RBP21.05■□□□□ 0.96
C4orf48-201ENST00000409248 CCNYQ8ND76 341 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 NSMCE1Q8WV22 266 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 ARRDC3Q96B67 414 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 HDAC11Q96DB2 347 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 ZNF599Q96NL3 588 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 NAP1L3Q99457 506 aaPredicted RBP21.05■□□□□ 0.96
C4orf48-201ENST00000409248 CINPQ9BW66 212 aaPredicted RBP21.05■□□□□ 0.96
C4orf48-201ENST00000409248 PREBQ9HCU5 417 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 SAE1Q9UBE0 346 aaPredicted RBP21.05■□□□□ 0.96
C4orf48-201ENST00000409248 LHX3Q9UBR4 397 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 EIF2B4Q9UI10 523 aaKnown RBP21.05■□□□□ 0.96
C4orf48-201ENST00000409248 SLC6A14Q9UN76 642 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 GON4LQ3T8J9 2241 aa21.05■□□□□ 0.96
C4orf48-201ENST00000409248 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.04■□□□□ 0.96
C4orf48-201ENST00000409248 PLK4O00444 970 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 FANCGO15287 622 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 BCAT2O15382 392 aaPredicted RBP21.04■□□□□ 0.96
C4orf48-201ENST00000409248 CD27P26842 260 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 MAOBP27338 520 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 OTUD4Q01804 1114 aaKnown RBP21.04■□□□□ 0.96
C4orf48-201ENST00000409248 GRM3Q14832 879 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 NOMO1Q15155 1222 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 MYLK3Q32MK0 819 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 PIP5KL1Q5T9C9 394 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 RASGEF1CQ8N431 466 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 ACTL9Q8TC94 416 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 COG1Q8WTW3 980 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 TSGA13Q96PP4 275 aa21.04■□□□□ 0.96
C4orf48-201ENST00000409248 TTC7AQ9ULT0 858 aaPredicted RBP21.04■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3DA0A087WVF3 549 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3IA0A087WXS9 549 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3EA0A087X179 549 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3KA0A087X1G2 549 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TCRBV7S2A1N4TA0A589 114 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3FA6NER0 549 aaPredicted RBP21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3LB9A6J9 549 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 PGRMC1O00264 195 aaKnown RBP21.03■□□□□ 0.96
C4orf48-201ENST00000409248 MAFKO60675 156 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 UGT2B4P06133 528 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 IGHV4-34P06331 123 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3HP0C7X1 549 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 CCNCP24863 283 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 NUDT1P36639 197 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 LIMK1P53667 647 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 PPIDQ08752 370 aaKnown RBP21.03■□□□□ 0.96
C4orf48-201ENST00000409248 XRCC4Q13426 336 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 CYTH1Q15438 398 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 ZNF805Q5CZA5 627 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3GQ6DHY5 549 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3CQ6IPX1 549 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 ADAT2Q7Z6V5 191 aaKnown RBP21.03■□□□□ 0.96
C4orf48-201ENST00000409248 CCDC13Q8IYE1 715 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TBC1D3Q8IZP1 549 aaPredicted RBP21.03■□□□□ 0.96
C4orf48-201ENST00000409248 BBS5Q8N3I7 341 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 TFB1MQ8WVM0 346 aaKnown RBP21.03■□□□□ 0.96
C4orf48-201ENST00000409248 EXOC2Q96KP1 924 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 FRMD8P1Q9BZ68 369 aaPredicted RBP21.03■□□□□ 0.96
C4orf48-201ENST00000409248 CAPN10Q9HC96 672 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 SEPT3Q9UH03 358 aa21.03■□□□□ 0.96
C4orf48-201ENST00000409248 HACD1B0YJ81 288 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 H7C0C1 242 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 SYPP08247 313 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 ADRB3P13945 408 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 HSPA9P38646 679 aaKnown RBP21.02■□□□□ 0.96
C4orf48-201ENST00000409248 ATP5OP48047 213 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 RENBPP51606 427 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 EIF3EP60228 445 aaKnown RBP21.02■□□□□ 0.96
C4orf48-201ENST00000409248 IRX4P78413 519 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 AP1B1Q10567 949 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 ZNF235Q14590 738 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 TEAD4Q15561 434 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 FBXL19Q6PCT2 694 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 ZC3H18Q86VM9 953 aaKnown RBP21.02■□□□□ 0.96
C4orf48-201ENST00000409248 TRIM69Q86WT6 500 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 ACTRT1Q8TDG2 376 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 MS4A14Q96JA4 679 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 LGMNQ99538 433 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 SHROOM3Q8TF72 1996 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 PCDH15Q96QU1 1955 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 CFAP54Q96N23 3096 aa21.02■□□□□ 0.96
C4orf48-201ENST00000409248 A0A1W2PPC4 97 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 ZNF185O15231 689 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 ZNF189O75820 626 aaPredicted RBP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 GKP32189 559 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 MAPK8P45983 427 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 AFF3P51826 1226 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms