RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 KITP10721 976 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 RALBP11234 206 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 LAMB3Q13751 1172 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 RFTN1Q14699 578 aaPredicted RBP24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 ALG1LQ6GMV1 187 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 SPATA31D4Q6ZUB0 917 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 OTOP2Q7RTS6 562 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 TNS4Q8IZW8 715 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 ELMO2Q96JJ3 720 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 CYP2S1Q96SQ9 504 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 MGME1Q9BQP7 344 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 STK39Q9UEW8 545 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 MID2Q9UJV3 735 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 ACTL7AQ9Y615 435 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 CHD5Q8TDI0 1954 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 PHGDHO43175 533 aaKnown RBP24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 NQO1P15559 274 aaKnown RBP24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 AVPR1AP37288 418 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 CSRP3P50461 194 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 RNF219Q5W0B1 726 aaPredicted RBP24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 CLNKQ7Z7G1 428 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 LCA5Q86VQ0 697 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 MUC3BQ9H195 1237 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 TBC1D30Q9Y2I9 924 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 ANAPC1Q9H1A4 1944 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 ITM2AO43736 263 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 LILRB3O75022 631 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 FGF18O76093 207 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 HAUS5O94927 633 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 LATS1O95835 1130 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 COL6A2P12110 1019 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 GLDCP23378 1020 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 CRABP2P29373 138 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 SERPINB3P29508 390 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 RAB10P61026 200 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 NECAB2Q7Z6G3 386 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 PPP4R1Q8TF05 950 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 PSKH2Q96QS6 385 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 TASP1Q9H6P5 420 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 SAR1AQ9NR31 198 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 MARCOQ9UEW3 520 aaPredicted RBP24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 TRIM33Q9UPN9 1127 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 SSX2IPQ9Y2D8 614 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 ACOT9Q9Y305 439 aa24.87■■□□□ 1.57
DNMT3A-206ENST00000406659 C2orf71A6NGG8 1288 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 CBX4O00257 560 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 SLC7A4O43246 635 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 DNAJC6O75061 913 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 LYPLA1O75608 230 aaPredicted RBP24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 STMN1P16949 149 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 DNAJB1P25685 340 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 TARSP26639 723 aaKnown RBP24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 SLC14A2Q15849 920 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 ASRGL1Q7L266 308 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 ARL14EPQ8N8R7 260 aaPredicted RBP24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 GPATCH11Q8N954 259 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 OR13J1Q8NGT2 312 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 OR6P1Q8NGX9 317 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 SKA1Q96BD8 255 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 SCYL1Q96KG9 808 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 ZFRQ96KR1 1074 aaKnown RBP24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 ACE2Q9BYF1 805 aaPredicted RBP24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 WWP1Q9H0M0 922 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 FBXO6Q9NRD1 293 aaPredicted RBP24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 STOML2Q9UJZ1 356 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 RUVBL2Q9Y230 463 aaKnown RBP24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 ASB3Q9Y575 518 aa24.86■■□□□ 1.57
DNMT3A-206ENST00000406659 ZBBXA8MT70 800 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 SLC35E2BP0CK96 405 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 HDCP19113 662 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 SLC12A2P55011 1212 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 PRAMEP78395 509 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 ITGA9Q13797 1035 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 HDAC10Q969S8 669 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 SLC22A12Q96S37 553 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 C1QTNF1Q9BXJ1 281 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 ZBP1Q9H171 429 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 NOD2Q9HC29 1040 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 IL23AQ9NPF7 189 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 ARHGEF3Q9NR81 526 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 KLC4Q9NSK0 619 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 HAO1Q9UJM8 370 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 DNAJC16Q9Y2G8 782 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 G3V2L1 256 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 TBL1XO60907 577 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 NDST3O95803 873 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 AQP5P55064 265 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 ABCE1P61221 599 aaKnown RBP24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 KCNJ2P63252 427 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 ELF3P78545 371 aaPredicted RBP24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 POU4F1Q01851 419 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 GALNT3Q14435 633 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 TXNDC8Q6A555 127 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 CYB5D1Q6P9G0 228 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 WDR75Q8IWA0 830 aaKnown RBP24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 MFSD6LQ8IWD5 586 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 KIF2BQ8N4N8 673 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 FIBCD1Q8N539 461 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 RDH11Q8TC12 318 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 BLOC1S5Q8TDH9 187 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms