RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TXNDC5Q8NBS9 432 aaKnown RBP10.84□□□□□ -0.67
CLIP4-204ENST00000404424 NPLOC4Q8TAT6 608 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 SPPL2BQ8TCT7 592 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 PPP1R13LQ8WUF5 828 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 NDNQ99608 321 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 NPAS2Q99743 824 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 OMDQ99983 421 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 FSD1LQ9BXM9 530 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 MEAF6Q9HAF1 191 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 GTSE1Q9NYZ3 720 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 PTTG2Q9NZH5 202 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 FBXO5Q9UKT4 447 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 C17orf102A2RUQ5 167 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 PGM3O95394 542 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 C8BP07358 591 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 RBP1P09455 135 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 CPB1P15086 417 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 IGFBP6P24592 240 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 YY1P25490 414 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 RPL9P32969 192 aaKnown RBP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 MSX2P35548 267 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 PFKPQ01813 784 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 ZNF470Q6ECI4 717 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 KLC3Q6P597 504 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 RANBP10Q6VN20 620 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 ARHGAP36Q6ZRI8 547 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 ANKRD23Q86SG2 305 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 TLK2Q86UE8 772 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 SLC22A9Q8IVM8 553 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 ALDH16A1Q8IZ83 802 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 MARK4Q96L34 752 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 KLHL32Q96NJ5 620 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 KATNAL1Q9BW62 490 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 IGSF5Q9NSI5 407 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 TBC1D13Q9NVG8 400 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 PCDHGA7Q9Y5G6 932 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 TIMM13Q9Y5L4 95 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 KLHL33A6NCF5 533 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 STX16-NPEPL1H3BU86 382 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 UBDO15205 165 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 IPO13O94829 963 aaKnown RBP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 MYCNP04198 464 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 CPT1AP50416 773 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 CLCNKBP51801 687 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 INHBCP55103 352 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 SULT2A1Q06520 285 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 TECRLQ5HYJ1 363 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 NEPROQ6NW34 567 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 CNSTQ6PJW8 725 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 GALNT7Q86SF2 657 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 RNF148Q8N7C7 305 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 MYLPFQ96A32 169 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 TSPAN17Q96FV3 270 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 DUS3LQ96G46 650 aaKnown RBP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 MS4A4AQ96JQ5 239 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 CNBD2Q96M20 576 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 ACBD6Q9BR61 282 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 SIK2Q9H0K1 926 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 RBM22Q9NW64 420 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLIP4-204ENST00000404424 ADA2Q9NZK5 511 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 SLC2A6Q9UGQ3 507 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 AP4S1Q9Y587 144 aa10.83□□□□□ -0.68
CLIP4-204ENST00000404424 CCL15-CCL14A0A0B4J2E2 113 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 HEATR9A2RTY3 570 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 TMEM233B4DJY2 109 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 IRAK2O43187 625 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 PENKP01210 267 aaPredicted RBP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 LTA4HP09960 611 aaKnown RBP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 ETS2P15036 469 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 LEPRP48357 1165 aaKnown RBP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 CLCN5P51795 746 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 MYBPC1Q00872 1141 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 RHDQ02161 417 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 LRP8Q14114 963 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 ACAP2Q15057 778 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 SLC14A2Q15849 920 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 CCL15Q16663 113 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 MANEALQ5VSG8 457 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 IRAK1BP1Q5VVH5 260 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 FAM171BQ6P995 826 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 GK5Q6ZS86 529 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 SPATA6LQ8N4H0 392 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 MRGPRX2Q96LB1 330 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 TRMOQ9BU70 441 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 SLC2A11Q9BYW1 496 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 SLC39A8Q9C0K1 460 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 TRPV6Q9H1D0 765 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 ARNT2Q9HBZ2 717 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 CHST12Q9NRB3 414 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 FAM105AQ9NUU6 356 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 CACNA2D2Q9NY47 1150 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 FNIP2Q9P278 1114 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 KCNU1A8MYU2 1149 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 PDLIM1O00151 329 aa10.82□□□□□ -0.68
CLIP4-204ENST00000404424 PSMD12O00232 456 aaPredicted RBP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 RNASEH2AO75792 299 aaKnown RBP10.82□□□□□ -0.68
CLIP4-204ENST00000404424 OR6B1O95007 311 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms