RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SCAND2PQ9GZW5 306 aaPredicted RBP12.07□□□□□ -0.48
SPTLC1P3-201ENST00000403408 INTS2Q9H0H0 1204 aaKnown RBP12.07□□□□□ -0.48
SPTLC1P3-201ENST00000403408 RAB6CQ9H0N0 254 aa12.07□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SEMA6CQ9H3T2 930 aa12.07□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ZDHHC6Q9H6R6 413 aa12.07□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ANKRD36A6QL64 1941 aa12.07□□□□□ -0.48
SPTLC1P3-201ENST00000403408 HIVEP3Q5T1R4 2406 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 FAM170AA1A519 330 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 HSF2BPO75031 334 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 DAB1O75553 588 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 CCL4P13236 92 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 GNA15P30679 374 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 HK3P52790 923 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 THOP1P52888 689 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PPARDQ03181 441 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PTPN20Q4JDL3 420 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ESRP1Q6NXG1 681 aaKnown RBP12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 LEKR1Q6ZMV7 388 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 C1orf131Q8NDD1 294 aaKnown RBP12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SPATA20Q8TB22 786 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 NT5C3BQ969T7 300 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 MAGEB5Q9BZ81 275 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 EDEM3Q9BZQ6 932 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SLC13A1Q9BZW2 595 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 AJAP1Q9UKB5 411 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 GPR34Q9UPC5 381 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 COQ6Q9Y2Z9 468 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 RNF215Q9Y6U7 377 aa12.06□□□□□ -0.48
SPTLC1P3-201ENST00000403408 A0A1W2PQ27 194 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 A0A1W2PQ64 194 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ILVBLA1L0T0 632 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 UGT2B4P06133 528 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 JMJD7P0C870 316 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 BMP6P22004 513 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 OR1E1P30953 314 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 NOS2P35228 1153 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 RECQLP46063 649 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 MAPK10P53779 464 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 YPEL5P62699 121 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 LRRC63Q05C16 580 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 IRF4Q15306 451 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 KLHL40Q2TBA0 621 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 WSCD2Q2TBF2 565 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ZNF805Q5CZA5 627 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 EFHC1Q5JVL4 640 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ATXN7L2Q5T6C5 722 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 TTI2Q6NXR4 508 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 C11orf57Q6ZUT1 292 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SLC26A9Q7LBE3 791 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 CCNJLQ8IV13 435 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 HID1Q8IV36 788 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 TRIM59Q8IWR1 403 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SNX21Q969T3 373 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 KLHL32Q96NJ5 620 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 TBCBQ99426 244 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 EPAS1Q99814 870 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 TSG101Q99816 390 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 STRADBQ9C0K7 418 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 GDPD2Q9HCC8 539 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ATP13A1Q9HD20 1204 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 UBE2TQ9NPD8 197 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 NEU3Q9UQ49 428 aa12.05□□□□□ -0.48
SPTLC1P3-201ENST00000403408 DOPEY1Q5JWR5 2465 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 POLQO75417 2590 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 A0A1W2PQC6 194 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 P4HA2O15460 535 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SFTPCP11686 197 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 TIMP2P16035 220 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 POLE2P56282 527 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 B4GALNT1Q00973 533 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SLC6A3Q01959 620 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 GNA12Q03113 381 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PTK2BQ14289 1009 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ISM2Q6H9L7 571 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 OGFOD3Q6PK18 319 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 BNIPLQ7Z465 357 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SPRED1Q7Z699 444 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 FMR1NBQ8N0W7 255 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ZNF397Q8NF99 534 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 NKD1Q969G9 470 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 RAB7BQ96AH8 199 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PDXPQ96GD0 296 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 CEP63Q96MT8 703 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 TMEM74Q96NL1 305 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 WRAP53Q9BUR4 548 aaKnown RBP12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 WDCPQ9H6R7 721 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PLCB1Q9NQ66 1216 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 APPL1Q9UKG1 709 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PLAAQ9Y263 795 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 OR1A2Q9Y585 309 aa12.04□□□□□ -0.48
SPTLC1P3-201ENST00000403408 BLACEA4D250 179 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 TMX2-CTNND1H3BSU7 103 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 NEMP1O14524 444 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 INSIG1O15503 277 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 B4GAT1O43505 415 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 MED7O43513 233 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SRGAP2O75044 1071 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms