RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 HABP4Q5JVS0 413 aaKnown RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SYPL2Q5VXT5 272 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TMEM154Q6P9G4 183 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 DNAJB7Q7Z6W7 309 aaPredicted RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ADGRG6Q86SQ4 1221 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TMEM135Q86UB9 458 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ITIH5Q86UX2 942 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 DCLK2Q8N568 766 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 EFHBQ8N7U6 833 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 NETO2Q8NC67 525 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 VN1R2Q8NFZ6 395 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 OR52K1Q8NGK4 314 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 IRGQQ8WZA9 623 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ZNF669Q96BR6 464 aaPredicted RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CMTM5Q96DZ9 223 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TRMT2BQ96GJ1 504 aaKnown RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FCRL3Q96P31 734 aaPredicted RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PNPOQ9NVS9 261 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ZDHHC7Q9NXF8 308 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TRHDEQ9UKU6 1024 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SCML2Q9UQR0 700 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 GREB1Q4ZG55 1949 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MAGEB16A2A368 324 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TMEM114B3SHH9 223 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ZNF195O14628 629 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CCNT2O60583 730 aaKnown RBP16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ERCC2P18074 760 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PRDX6P30041 224 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TPI1P60174 286 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SEMA3BQ13214 749 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 GSTA3Q16772 222 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CES3Q6UWW8 571 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 STRA8Q7Z7C7 330 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CASP10Q92851 521 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 GORASP1Q9BQQ3 440 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 GBA3Q9H227 469 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 IGFLR1Q9H665 355 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SCOCQ9UIL1 159 aa16.12■□□□□ 0.17
CHRFAM7A-203ENST00000401522 EIF4E1BA6NMX2 242 aaKnown RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MEI4A8MW99 385 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 KCNK1O00180 336 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 RFPL2O75678 378 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 POU2F2P09086 479 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ZNF135P52742 658 aaPredicted RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CSE1LP55060 971 aaKnown RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ITGA9Q13797 1035 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ANKRD20A4Q4UJ75 823 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FSCBQ5H9T9 825 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PDPK2PQ6A1A2 396 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ITPRIPL1Q6GPH6 555 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 BHLHA9Q7RTU4 235 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ZNF512Q96ME7 567 aaPredicted RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 YJEFN3A6XGL0 299 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TIMM44O43615 452 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 NPY2RP49146 381 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ADAM15Q13444 863 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TAF12Q16514 161 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 KCTD11Q693B1 232 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 HFE2Q6ZVN8 426 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CMC1Q7Z7K0 106 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MON1AQ86VX9 555 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ELMOD1Q8N336 334 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 DNAAF3Q8N9W5 541 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PGAP3Q96FM1 320 aaPredicted RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 NR1H4Q96RI1 486 aaPredicted RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 GAS2L1Q99501 681 aaPredicted RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 VAT1Q99536 393 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 WDR6Q9NNW5 1121 aaKnown RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 DZANK1Q9NVP4 752 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 RRN3Q9NYV6 651 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MID2Q9UJV3 735 aa16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MAGED2Q9UNF1 606 aaPredicted RBP16.11■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SZT2Q5T011 3432 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ZCWPW2A0A1B0GU75 182 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MAGEA13PA6NCF6 341 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ARHGAP42A6NI28 874 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FAM72CH0Y354 149 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 AP3B1O00203 1094 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 GLP2RO95838 553 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FYNP06241 537 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SP100P23497 879 aaPredicted RBP16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ARRB2P32121 409 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 HADHAP40939 763 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SLC25A3Q00325 362 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 BTKQ06187 659 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TAF10Q12962 218 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ARL13BQ3SXY8 428 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FAM72AQ5TYM5 149 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FAM72DQ6L9T8 149 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FSTL4Q6MZW2 842 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CLEC14AQ86T13 490 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FAM72BQ86X60 149 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TP53INP2Q8IXH6 220 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 KBTBD2Q8IY47 623 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ACTRT2Q8TDY3 377 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 UCMAQ8WVF2 138 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 OVCA2Q8WZ82 227 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 JADE3Q92613 823 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 HDAC11Q96DB2 347 aa16.1■□□□□ 0.17
CHRFAM7A-203ENST00000401522 LRRC3Q9BY71 257 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms