RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 MAGEC3Q8TD91 643 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 PHF10Q8WUB8 498 aaKnown RBP11.88□□□□□ -0.51
TMF1-201ENST00000398559 HPS1Q92902 700 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 KCNQ5Q9NR82 932 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 ING4Q9UNL4 249 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 LIN7AO14910 233 aaPredicted RBP11.88□□□□□ -0.51
TMF1-201ENST00000398559 HDAC3O15379 428 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 PLOD3O60568 738 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 AVILO75366 819 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 RPLP2P05387 115 aaKnown RBP11.88□□□□□ -0.51
TMF1-201ENST00000398559 CCNB1P14635 433 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 ITGA2P17301 1181 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 AXLP30530 894 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 PLD1Q13393 1074 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 ZC3H12AQ5D1E8 599 aaKnown RBP11.88□□□□□ -0.51
TMF1-201ENST00000398559 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.88□□□□□ -0.51
TMF1-201ENST00000398559 SIX5Q8N196 739 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 SMYD1Q8NB12 490 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 GSTCDQ8NEC7 633 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 QRFPRQ96P65 431 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 ASB8Q9H765 288 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 SNX15Q9NRS6 342 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 TBC1D30Q9Y2I9 924 aa11.88□□□□□ -0.51
TMF1-201ENST00000398559 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 G3V2T6 193 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 ECDO95905 644 aaPredicted RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 ABATP80404 500 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 HSPA14Q0VDF9 509 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 LPIN1Q14693 890 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 DSG4Q86SJ6 1040 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 FAM71AQ8IYT1 594 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 LRRC17Q8N6Y2 441 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 CDYL2Q8N8U2 506 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 PCSK9Q8NBP7 692 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 LENG9Q96B70 501 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 ACE2Q9BYF1 805 aaPredicted RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 VPS4AQ9UN37 437 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 CORO2BQ9UQ03 480 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 GUCY1B2O75343 617 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 UQCRBP14927 111 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 LRRC38Q5VT99 294 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 APTXQ7Z2E3 356 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 ZNF410Q86VK4 478 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 QKIQ96PU8 341 aaKnown RBP eCLIP11.87□□□□□ -0.512e-6■■■■■ 36.6
TMF1-201ENST00000398559 ARL8BQ9NVJ2 186 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 PRPF19Q9UMS4 504 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 COQ6Q9Y2Z9 468 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 SAMHD1Q9Y3Z3 626 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 NFASCO94856 1347 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 hCG_1818297A0A087WSY0 165 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 HAT1O14929 419 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 NPR3P17342 541 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 PTPN1P18031 435 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 ABL2P42684 1182 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 POLR2LP62875 67 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 FMO1Q01740 532 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 FNDC3BQ53EP0 1204 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 AFTPHQ6ULP2 937 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 GPRIN3Q6ZVF9 776 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 PALB2Q86YC2 1186 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 RDH11Q8TC12 318 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 EBNA1BP2Q99848 306 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 CLTCQ00610 1675 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 UGT2B15P54855 530 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 DRG2P55039 364 aaKnown RBP11.87□□□□□ -0.51
TMF1-201ENST00000398559 TGFB2P61812 414 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 MED22Q15528 200 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 SLC15A2Q16348 729 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 RAP1GAP2Q684P5 730 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 CACUL1Q86Y37 369 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 ABCG8Q9H221 673 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 EURLQ9NYK6 297 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 SLC17A7Q9P2U7 560 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 TP73O15350 636 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 KPNA6O60684 536 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 HIST1H2ABP04908 130 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 SERPINA4P29622 427 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 USP4Q13107 963 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 RNF19BQ6ZMZ0 732 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 ZNF662Q6ZS27 426 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 HIST3H2AQ7L7L0 130 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 HIST1H2ACQ93077 130 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 ZFYVE1Q9HBF4 777 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 CPA4Q9UI42 421 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 PCDHB12Q9Y5F1 795 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 DIP2AQ14689 1571 aa11.87□□□□□ -0.51
TMF1-201ENST00000398559 PRR5-ARHGAP8B1AHC4 643 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 PRKAR1AP10644 381 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 IL1R1P14778 569 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 HIRAP54198 1017 aaPredicted RBP11.86□□□□□ -0.51
TMF1-201ENST00000398559 ARHGAP8P85298 464 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 PPIL2Q13356 520 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 AP5B1Q2VPB7 878 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 CLYBLQ8N0X4 340 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 SSR3Q9UNL2 185 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 USP32Q8NFA0 1604 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 ATP6AP2A0A1C7CYW4 349 aa11.86□□□□□ -0.51
TMF1-201ENST00000398559 KPNA3O00505 521 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms