RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 ASB12Q8WXK4 309 aa14.45□□□□□ -0.1
HDDC2-202ENST00000398153 RBM41Q96IZ5 413 aaKnown RBP14.45□□□□□ -0.1
HDDC2-202ENST00000398153 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
HDDC2-202ENST00000398153 FADS3Q9Y5Q0 445 aa14.45□□□□□ -0.1
HDDC2-202ENST00000398153 PCDH15Q96QU1 1955 aa14.45□□□□□ -0.1
HDDC2-202ENST00000398153 CCDC66A2RUB6 948 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 UPK3BL1B0FP48 263 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 UPK3BL2E5RIL1 263 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 VILLO15195 856 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 SOCS5O75159 536 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 PCDH8O95206 1070 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 CER1O95813 267 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 ZNF883P0CG24 379 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 NFKBIAP25963 317 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 CD38P28907 300 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 GKP32189 559 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 CDKN2BP42772 138 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 MMP13P45452 471 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 COPS2P61201 443 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 BCL2L1Q07817 233 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 PDK1Q15118 436 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 TMEM259Q4ZIN3 620 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 TFDP3Q5H9I0 405 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 NAPEPLDQ6IQ20 393 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 PLD5Q8N7P1 536 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 MFSD2AQ8NA29 543 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 ACRBPQ8NEB7 543 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 MAML1Q92585 1016 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 RMDN1Q96DB5 314 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 SERAC1Q96JX3 654 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 NUDCD1Q96RS6 583 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 MGME1Q9BQP7 344 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 TSGA10Q9BZW7 698 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 LACRTQ9GZZ8 138 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 GRPEL1Q9HAV7 217 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 RXFP3Q9NSD7 469 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 DNAAF2Q9NVR5 837 aaKnown RBP14.44□□□□□ -0.1
HDDC2-202ENST00000398153 DTLQ9NZJ0 730 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 SALL4Q9UJQ4 1053 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 TFR2Q9UP52 801 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 EFR3BQ9Y2G0 817 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 PCDHA3Q9Y5H8 950 aa14.44□□□□□ -0.1
HDDC2-202ENST00000398153 A0A1W2PQU0 124 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 GOLGA6L3A6NEY3 463 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 RNF103O00237 685 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 TM4SF5O14894 197 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 AREL1O15033 823 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 CR2P20023 1033 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 XPAP23025 273 aaPredicted RBP14.43□□□□□ -0.1
HDDC2-202ENST00000398153 CTNNA1P35221 906 aaKnown RBP14.43□□□□□ -0.1
HDDC2-202ENST00000398153 CSNK1EP49674 416 aaKnown RBP14.43□□□□□ -0.1
HDDC2-202ENST00000398153 SCNN1BP51168 640 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 PPP2CBP62714 309 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 PPP2CAP67775 309 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 PPIDQ08752 370 aaKnown RBP14.43□□□□□ -0.1
HDDC2-202ENST00000398153 GRIK2Q13002 908 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 PPP2R5EQ16537 467 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 UGP2Q16851 508 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 ZNF284Q2VY69 593 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 CFAP58Q5T655 872 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 ALG1LQ6GMV1 187 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 MFSD7Q6UXD7 560 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 ADAT2Q7Z6V5 191 aaKnown RBP14.43□□□□□ -0.1
HDDC2-202ENST00000398153 NETO2Q8NC67 525 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 RNF25Q96BH1 459 aaPredicted RBP14.43□□□□□ -0.1
HDDC2-202ENST00000398153 ECHDC3Q96DC8 303 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 EXOC2Q96KP1 924 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 LENG8Q96PV6 779 aaPredicted RBP14.43□□□□□ -0.1
HDDC2-202ENST00000398153 EBF2Q9HAK2 575 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 HS3ST3A1Q9Y663 406 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 DUSP10Q9Y6W6 482 aa14.43□□□□□ -0.1
HDDC2-202ENST00000398153 CFAP69A5D8W1 941 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 C4orf47A7E2U8 309 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 MIF4GDA9UHW6 222 aaKnown RBP14.42□□□□□ -0.1
HDDC2-202ENST00000398153 NEMP1O14524 444 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 PPP1R12AO14974 1030 aaPredicted RBP14.42□□□□□ -0.1
HDDC2-202ENST00000398153 INSIG1O15503 277 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 KRT86O43790 486 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 OPHN1O60890 802 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 CCNB1P14635 433 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 TIMP2P16035 220 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 TGM2P21980 687 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 HNRNPA2B1P22626 353 aaKnown RBP14.42□□□□□ -0.1
HDDC2-202ENST00000398153 CTNNA2P26232 953 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 CETN2P41208 172 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 C21orf59P57076 290 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 GBE1Q04446 702 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 SLC10A2Q12908 348 aaPredicted RBP14.42□□□□□ -0.1
HDDC2-202ENST00000398153 STAT4Q14765 748 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 ERAP2Q6P179 960 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 SPOCD1Q6ZMY3 1216 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 ZNF662Q6ZS27 426 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 RFX6Q8HWS3 928 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 LRRC8AQ8IWT6 810 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 CCDC13Q8IYE1 715 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 MINDY1Q8N5J2 469 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 LRRC57Q8N9N7 239 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 CCNYQ8ND76 341 aa14.42□□□□□ -0.1
HDDC2-202ENST00000398153 GTPBP2Q9BX10 602 aaKnown RBP14.42□□□□□ -0.1
HDDC2-202ENST00000398153 C1QTNF2Q9BXJ5 285 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms