RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 AP1B1Q10567 949 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 ZNF211Q13398 564 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 CSRP2Q16527 193 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 TCEAL6Q6IPX3 200 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 BZW1Q7L1Q6 419 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 CAMK1DQ8IU85 385 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 P3H4Q92791 437 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 TCEAL3Q969E4 200 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 SCUBE2Q9NQ36 999 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 RBM22Q9NW64 420 aaKnown RBP eCLIP21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 EIF2B4Q9UI10 523 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 TTLL3Q9Y4R7 772 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 PATE3B3GLJ2 98 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 KCNK1O00180 336 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 SERPINA4P29622 427 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 BCL2L1Q07817 233 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 SF3A2Q15428 464 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 CFAP58Q5T655 872 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 CCDC181Q5TID7 509 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 B4GALNT4Q76KP1 1039 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 ZCCHC9Q8N567 271 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 ZNF641Q96N77 438 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 NUDCD1Q96RS6 583 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 SUV39H2Q9H5I1 410 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 DKK3Q9UBP4 350 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 SUSD2Q9UGT4 822 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 EFR3BQ9Y2G0 817 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 ANKRD36A6QL64 1941 aa21.42■■□□□ 1.02
TSPAN4-206ENST00000397408 PI4KAP42356 2102 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 C10orf142B7Z368 130 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 HLA-DQB2P05538 268 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 ZNF806P0C7X5 589 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 CCR5P51681 352 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 LRRC73Q5JTD7 316 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 KIAA2013Q8IYS2 634 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 GPR161Q8N6U8 529 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 NSMCE3Q96MG7 304 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 POLR1EQ9GZS1 481 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 BRD8Q9H0E9 1235 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 NOD2Q9HC29 1040 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 HAUS2Q9NVX0 235 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 ITM2BQ9Y287 266 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 FADS3Q9Y5Q0 445 aa21.41■■□□□ 1.02
TSPAN4-206ENST00000397408 TSPAN11A1L157 253 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 APOC4-APOC2K7ER74 178 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 RNGTTO60942 597 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 PCDH8O95206 1070 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 JCHAINP01591 159 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 APOC2P02655 101 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 CFIP05156 583 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 GNSP15586 552 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 CD27P26842 260 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 MAT2AP31153 395 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 IFI35P80217 286 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 ITKQ08881 620 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 ZBTB17Q13105 803 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 TRIM61Q5EBN2 209 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 PRR23CQ6ZRP0 262 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 RABEPKQ7Z6M1 372 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 TTC7BQ86TV6 843 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 ZC3H18Q86VM9 953 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 TRIM69Q86WT6 500 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 PAF1Q8N7H5 531 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 RAB7BQ96AH8 199 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 SEMA3CQ99985 751 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 SEPT10Q9P0V9 454 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 AMACRQ9UHK6 382 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 TPX2Q9ULW0 747 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 SLCO1B1Q9Y6L6 691 aa21.4■■□□□ 1.02
TSPAN4-206ENST00000397408 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 A0A1W2PQU0 124 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 KHNYNO15037 678 aaKnown RBP21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 LATO43561 262 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 AP1G1O43747 822 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 XPAP23025 273 aaPredicted RBP21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 PRKD1Q15139 912 aaPredicted RBP21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 DUOXA1Q1HG43 343 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 RALGPS1Q5JS13 557 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 MEI1Q5TIA1 1274 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 BRAT1Q6PJG6 821 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 ZSWIM9Q86XI8 627 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 C12orf50Q8NA57 414 aaPredicted RBP21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 TRIM58Q8NG06 486 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 CEP76Q8TAP6 659 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 TFB1MQ8WVM0 346 aaKnown RBP21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 IL12RB2Q99665 862 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 ORAI3Q9BRQ5 295 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 CEP41Q9BYV8 373 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 GGT7Q9UJ14 662 aa21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.39■■□□□ 1.02
TSPAN4-206ENST00000397408 A0A1B0GTW7 788 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 A0A1W2PPC4 97 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 NEMP1O14524 444 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 BCAT2O15382 392 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 SPINT1O43278 529 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 TJP3O95049 919 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 TIMP2P16035 220 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 DSC2Q02487 901 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 CCDC173Q0VFZ6 552 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms