RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 DGKDQ16760 1214 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 OTUD1Q5VV17 481 aaPredicted RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 ZBTB46Q86UZ6 589 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 PIGZQ86VD9 579 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 LSMEM2Q8N112 164 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 NPWQ8N729 165 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 ANKFN1Q8N957 763 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 ZNF420Q8TAQ5 688 aaPredicted RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 PBXIP1Q96AQ6 731 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 FBXL8Q96CD0 374 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 CELF6Q96J87 481 aaKnown RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 POLR2AP24928 1970 aaKnown RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 RBM47A0AV96 593 aaKnown RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 ZNF24P17028 368 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 CDH3P22223 829 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 ETFBP38117 255 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 CD151P48509 253 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 TRAP1Q12931 704 aaKnown RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 ZBTB17Q13105 803 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 CTBP1Q13363 440 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 CHPT1Q8WUD6 406 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 OTUD5Q96G74 571 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 DOK1Q99704 481 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 IL22Q9GZX6 179 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 NAA50Q9GZZ1 169 aaKnown RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 NXF3Q9H4D5 531 aaKnown RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 EIF2B3Q9NR50 452 aaKnown RBP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 XPR1Q9UBH6 696 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 TLK1Q9UKI8 766 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 ZNF839A8K0R7 811 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 SPTLC1O15269 473 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 HSPA1AP0DMV8 641 aaKnown RBP24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 HSPA1BP0DMV9 641 aaKnown RBP24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 DCKP27707 260 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 BCAT1P54687 386 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 RAB39AQ14964 217 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 DENND6AQ8IWF6 608 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 TMEM151AQ8N4L1 468 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 TNIP2Q8NFZ5 429 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 FAM110BQ8TC76 370 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 CYP4F12Q9HCS2 524 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 GTSE1Q9NYZ3 720 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 GMPR2Q9P2T1 348 aaKnown RBP24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 MID2Q9UJV3 735 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 ITGB1BP2Q9UKP3 347 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 HACD1B0YJ81 288 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 YBX3P16989 372 aaKnown RBP eCLIP24.21■■□□□ 1.472e-7■□□□□ 10.7
CSNK1E-203ENST00000396832 ERCC2P18074 760 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 NFKB1P19838 968 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 MATKP42679 507 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 TMED10P49755 219 aaKnown RBP24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 MPP1Q00013 466 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 MOGQ16653 247 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 TANKQ92844 425 aa24.21■■□□□ 1.47
CSNK1E-203ENST00000396832 CLASP2O75122 1294 aaKnown RBP24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 BAIAP3O94812 1187 aa24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 LGALS2P05162 132 aa24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 GNL1P36915 607 aaPredicted RBP24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 NIPAL1Q6NVV3 410 aa24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 RNF135Q8IUD6 432 aa24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 FSTL5Q8N475 847 aaPredicted RBP24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 CBR4Q8N4T8 237 aa24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 DUS3LQ96G46 650 aaKnown RBP24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 MLPHQ9BV36 600 aaPredicted RBP24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 FTHL17Q9BXU8 183 aa24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 SFMBT1Q9UHJ3 866 aa24.2■■□□□ 1.47
CSNK1E-203ENST00000396832 ZNF487B1APH4 448 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 I6L893 689 aaPredicted RBP24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 BMP2P12643 396 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 MYF6P23409 242 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 LRP8Q14114 963 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 ANKRD26P1Q6NSI1 321 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 LRRC8EQ6NSJ5 796 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 ANKRD52Q8NB46 1076 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 CANT1Q8WVQ1 401 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 TCF12Q99081 682 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 TRPC7Q9HCX4 862 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 CACNA2D2Q9NY47 1150 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 PIM2Q9P1W9 311 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 DLGAP1O14490 977 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 IGFBP6P24592 240 aaPredicted RBP24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 CD68P34810 354 aaPredicted RBP24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 PLK1P53350 603 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 NME5P56597 212 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 STX5Q13190 355 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 PITRM1Q5JRX3 1037 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 PSTKQ8IV42 348 aaKnown RBP24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 POLR1BQ9H9Y6 1135 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 SPAG4Q9NPE6 437 aa24.2■■□□□ 1.46
CSNK1E-203ENST00000396832 PAPPA2Q9BXP8 1791 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 CABYRO75952 493 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 APOA4P06727 396 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 GLUD2P49448 558 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 POU6F1Q14863 301 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 EGFLAMQ63HQ2 1017 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 EXOC8Q8IYI6 725 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 SIX6OS1Q8N1H7 587 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 SLC39A3Q9BRY0 314 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 ADI1Q9BV57 179 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 SSC5DA1L4H1 1573 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms