RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 EIF2S3P41091 472 aaKnown RBP10.52□□□□□ -0.73
NEDD8-202ENST00000396828 SLC1A1P43005 524 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 OXCT1P55809 520 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 FGL2Q14314 439 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 PIGHQ14442 188 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-202ENST00000396828 MESDQ14696 234 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 SETMARQ53H47 684 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-202ENST00000396828 ZNF542PQ5EBM4 170 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 PPP1R15BQ5SWA1 713 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 GCNT7Q6ZNI0 430 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 DPY19L3Q6ZPD9 716 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 ARCQ7LC44 396 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 BNIPLQ7Z465 357 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 IQCHQ86VS3 1027 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 OR13H1Q8NG92 308 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 GRIN3AQ8TCU5 1115 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 FNIP1Q8TF40 1166 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 KLHDC7BQ96G42 594 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 WDR24Q96S15 920 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 NAPGQ99747 312 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-202ENST00000396828 PREBQ9HCU5 417 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 NDFIP2Q9NV92 336 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 AMFRQ9UKV5 643 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 PCDHB1Q9Y5F3 818 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 AK5Q9Y6K8 562 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 WASF2Q9Y6W5 498 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 LY6G6EA0A0G2JKS1 128 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 E9PAM4 449 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 CASC3O15234 703 aaKnown RBP10.51□□□□□ -0.73
NEDD8-202ENST00000396828 RAD51BO15315 384 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 FFAR2O15552 330 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 SPOPO43791 374 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 BRINP1O60477 761 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 LEFTY1O75610 366 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 GPD1P21695 349 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 ACP1P24666 158 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 PSMA2P25787 234 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 GKP32189 559 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 MAN1A1P33908 653 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 RFC1P35251 1148 aaPredicted RBP10.51□□□□□ -0.73
NEDD8-202ENST00000396828 HNF1BP35680 557 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 RPL7AP62424 266 aaKnown RBP10.51□□□□□ -0.73
NEDD8-202ENST00000396828 ARF5P84085 180 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 DEUP1Q05D60 604 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 RTP5Q14D33 572 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 TMEM259Q4ZIN3 620 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 BRMS1LQ5PSV4 323 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 TPRG1LQ5T0D9 272 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 C6orf118Q5T5N4 469 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 C22orf39Q6P5X5 142 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 SLFN11Q7Z7L1 901 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 HORMAD1Q86X24 394 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 FAM131BQ86XD5 332 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 OXR1Q8N573 874 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 EMC1Q8N766 993 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 LRRC57Q8N9N7 239 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 TMIEQ8NEW7 156 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 NXPE2Q96DL1 559 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 PGAP3Q96FM1 320 aaPredicted RBP10.51□□□□□ -0.73
NEDD8-202ENST00000396828 BMFQ96LC9 184 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 CFAP57Q96MR6 1250 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 NCAPGQ9BPX3 1015 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 SPON2Q9BUD6 331 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 CALN1Q9BXU9 219 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 PRORYQ9H606 182 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 KLHL11Q9NVR0 708 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 KLF15Q9UIH9 416 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 TMEM59LQ9UK28 342 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 TPX2Q9ULW0 747 aaKnown RBP10.51□□□□□ -0.73
NEDD8-202ENST00000396828 CLCA2Q9UQC9 943 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 ALG6Q9Y672 507 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 U3KQA8 63 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 TRPM6Q9BX84 2022 aa10.51□□□□□ -0.73
NEDD8-202ENST00000396828 POM121BA6NF01 834 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 MIF4GDA9UHW6 222 aaKnown RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 NEBLO76041 1014 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 RNF8O76064 485 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 PROSCO94903 275 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 PCDH8O95206 1070 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 GJB6O95452 261 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 FTCDO95954 541 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 PAK4O96013 591 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 OR1E1P30953 314 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 SDC4P31431 198 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 ACVRL1P37023 503 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 ABCG1P45844 678 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 ZNF143P52747 638 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 OVGP1Q12889 678 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 ZNF211Q13398 564 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 ILKQ13418 452 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 RPS6KA1Q15418 735 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 SLC25A52Q3SY17 297 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 MEI1Q5TIA1 1274 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 Q6ZSR6 202 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 ERN2Q76MJ5 926 aaKnown RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 SETD3Q86TU7 594 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 NT5DC3Q86UY8 548 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 UBL4BQ8N7F7 174 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 NIPA2Q8N8Q9 360 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 DCBLD1Q8N8Z6 715 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms