RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 LRP4O75096 1905 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 COL5A1P20908 1838 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 A0A1W2PQU0 124 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 WNT9AO14904 365 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 GIPC1O14908 333 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 MUSKO15146 869 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 PJA2O43164 708 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 TSPAN6O43657 245 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 BUB1BO60566 1050 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 OPHN1O60890 802 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 CER1O95813 267 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 CSRP1P21291 193 aaKnown RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 COMTP21964 271 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 CD38P28907 300 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 GARSP41250 739 aaKnown RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 MAPK8P45983 427 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 RENBPP51606 427 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 SUOXP51687 545 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 ATXN3P54252 364 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 SLC10A7Q0GE19 358 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 SLC14A1Q13336 389 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 LBRQ14739 615 aaKnown RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 TAZQ16635 292 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 ZNF423Q2M1K9 1284 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 SLC9A4Q6AI14 798 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 C11orf63Q6NUN7 778 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 FBXL19Q6PCT2 694 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 PIP4P1Q86T03 277 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 IQCHQ86VS3 1027 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 RHOT1Q8IXI2 618 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 ATPAF2Q8N5M1 289 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 MFSD2AQ8NA29 543 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 TMEM145Q8NBT3 493 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 ASB12Q8WXK4 309 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 SPOCK2Q92563 424 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 MAML1Q92585 1016 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 EXOC2Q96KP1 924 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 ZNF641Q96N77 438 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 TSGA13Q96PP4 275 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 BAG1Q99933 345 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 CINPQ9BW66 212 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 GTPBP2Q9BX10 602 aaKnown RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 SUV39H2Q9H5I1 410 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 KLHL11Q9NVR0 708 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 DDX56Q9NY93 547 aaKnown RBP13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 SALL4Q9UJQ4 1053 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 WASF3Q9UPY6 502 aa13.51□□□□□ -0.25
HLA-DMA-202ENST00000395303 LRRD1A4D1F6 860 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 PRAMEF26H0Y7S4 382 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 PSTPIP1O43586 416 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 PCDH8O95206 1070 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 PIGNO95427 931 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 CD59P13987 128 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 TIMP2P16035 220 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 CCNCP24863 283 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 NOP2P46087 812 aaKnown RBP13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 RPS21P63220 83 aaKnown RBP13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 OVGP1Q12889 678 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 HNRNPDQ14103 355 aaKnown RBP13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 FGL2Q14314 439 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 IFI16Q16666 785 aaKnown RBP13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 KIF19Q2TAC6 998 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 RALGPS1Q5JS13 557 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 PGBD5Q8N414 524 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 PLD5Q8N7P1 536 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 OR2I1PQ8NGU4 316 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 HDAC11Q96DB2 347 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 ECHDC3Q96DC8 303 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 SERAC1Q96JX3 654 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 NSMCE3Q96MG7 304 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 MGME1Q9BQP7 344 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 GAREM1Q9H706 876 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 TFR2Q9UP52 801 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 PCDHGB2Q9Y5G2 931 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 SNX11Q9Y5W9 270 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 ALG6Q9Y672 507 aa13.5□□□□□ -0.25
HLA-DMA-202ENST00000395303 TRAFD1O14545 582 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 SPOPO43791 374 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 DFNA5O60443 496 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 IPO7O95373 1038 aaKnown RBP13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 HNRNPA2B1P22626 353 aaKnown RBP13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 MAT2AP31153 395 aaKnown RBP13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 NOVA1P51513 510 aaKnown RBP13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 VAV2P52735 878 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 AP1S1P61966 158 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 SLC10A2Q12908 348 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 ZNF235Q14590 738 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 HLA-BQ31612 363 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 TMEM52BQ4KMG9 183 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 SLC45A4Q5BKX6 768 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 ALG1LQ6GMV1 187 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 TIGD7Q6NT04 549 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 BRAT1Q6PJG6 821 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 LAYNQ6UX15 382 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 ADAT2Q7Z6V5 191 aaKnown RBP13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 TPCN2Q8NHX9 752 aa13.49□□□□□ -0.25
HLA-DMA-202ENST00000395303 FAM174AQ8TBP5 190 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms