RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 HNRNPCL2B2RXH8 293 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SYN3O14994 580 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SNPHO15079 494 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZMPSTE24O75844 475 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 GABBR2O75899 941 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PIAS1O75925 651 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SEMA3DO95025 777 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ALBP02768 609 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 FGFR1P11362 822 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 COL6A1P12109 1028 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CCL5P13501 91 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 DDX5P17844 614 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 RBL1P28749 1068 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 STT3AP46977 705 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 INHBCP55103 352 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PKNOX1P55347 436 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 INCA1Q0VD86 236 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 MMRN1Q13201 1228 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PLD1Q13393 1074 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SMAD1Q15797 465 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 MROH9Q5TGP6 573 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TTC39BQ5VTQ0 682 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 XKR5Q6UX68 686 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZDHHC24Q6UX98 284 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SETD3Q86TU7 594 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 MON1AQ86VX9 555 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PDSS2Q86YH6 399 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ALLCQ8N6M5 410 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 KYQ8NBH2 561 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 IPMKQ8NFU5 416 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZSCAN18Q8TBC5 510 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 SPPL2BQ8TCT7 592 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 OSCP1Q8WVF1 389 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 DPF3Q92784 378 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PCED1BQ96HM7 432 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 OLFM1Q99784 485 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 NAT9Q9BTE0 207 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 RAD21L1Q9H4I0 556 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 MRPL17Q9NRX2 175 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 GRHL1Q9NZI5 618 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UXTQ9UBK9 157 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 SUN2Q9UH99 717 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 NUDT5Q9UKK9 219 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SLC27A5Q9Y2P5 690 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 FUOMA2VDF0 154 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 C2CD4BA6NLJ0 364 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CCRL2O00421 344 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 PAPSS1O43252 624 aaPredicted RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 ZSCAN5DPP0CG00 497 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ME2P23368 584 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 KLRC2P26717 231 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 LRPAP1P30533 357 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ATP5C1P36542 298 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 PTPN9P43378 593 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 AIF1P55008 147 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 WNT7BP56706 349 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 FCHO2Q0JRZ9 810 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ZNF846Q147U1 533 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 TCEAL1Q15170 157 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 DDR2Q16832 855 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 LDLRAP1Q5SW96 308 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 SCARA3Q6AZY7 606 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 NIPAL1Q6NVV3 410 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 TUBA3EQ6PEY2 450 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 LAYNQ6UX15 382 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 NPNTQ6UXI9 565 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 PRR23CQ6ZRP0 262 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ZCCHC23Q6ZST2 131 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 RAB44Q7Z6P3 723 aaPredicted RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 HPS6Q86YV9 775 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 HERC6Q8IVU3 1022 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 BHLHE22Q8NFJ8 381 aaPredicted RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 IRGQQ8WZA9 623 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 SLC4A5Q9BY07 1137 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 EFCAB1Q9HAE3 211 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 TRPV5Q9NQA5 729 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 MARCH2Q9P0N8 246 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 GRID1Q9ULK0 1009 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 KAT6AQ92794 2004 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CENPXA8MT69 81 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 K7EPI3 171 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 HAS3O00219 553 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ZNF623O75123 536 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CKMP06732 381 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ECHS1P30084 290 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ETFBP38117 255 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 TLE2Q04725 743 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 KRR1Q13601 381 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 PSMD5Q16401 504 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 PCSK7Q16549 785 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 SMU1Q2TAY7 513 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ZNF829Q3KNS6 432 aaPredicted RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 PABPC1LQ4VXU2 614 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 PPM1LQ5SGD2 360 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CCSAPQ6IQ19 270 aaPredicted RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 OGFOD2Q6N063 350 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 NEK10Q6ZWH5 1172 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 AHI1Q8N157 1196 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CLEC4FQ8N1N0 589 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 FIBCD1Q8N539 461 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms