RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 OPN1MW3P0DN78 364 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ANXA7P20073 488 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 DLSTP36957 453 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 TMPRSS3P57727 454 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 PIGFQ07326 219 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CYP2A13Q16696 494 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ABLIM2Q6H8Q1 611 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CENPPQ6IPU0 288 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 PLBD1Q6P4A8 553 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SLC36A4Q6YBV0 504 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 LRRC70Q7Z2Q7 622 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 TMEM200AQ86VY9 491 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SLC22A9Q8IVM8 553 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 C8orf58Q8NAV2 365 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 KDM1BQ8NB78 822 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 OR8K5Q8NH50 307 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CLEC4CQ8WTT0 213 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ST8SIA2Q92186 375 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 WASF1Q92558 559 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 TNFRSF25Q93038 417 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 MSI2Q96DH6 328 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 COX4I2Q96KJ9 171 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 OSBPL8Q9BZF1 889 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 BARX1Q9HBU1 254 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 FSCN3Q9NQT6 498 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 DDX25Q9UHL0 483 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 QSOX1O00391 747 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 POLR2DO15514 142 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 SPATA31D3P0C874 917 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 BCRP11274 1271 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CDH13P55290 713 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CARD18P57730 90 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ARHGEF16Q5VV41 709 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 DPP8Q6V1X1 898 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 SPATA31D4Q6ZUB0 917 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 KIAA1328Q86T90 577 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CAMK1DQ8IU85 385 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 DDIASQ8IXT1 998 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CHST13Q8NET6 341 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 NLGN4YQ8NFZ3 816 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 SLC22A8Q8TCC7 542 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 EID2BQ96D98 161 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ENTPD7Q9NQZ7 604 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 KLHL8Q9P2G9 620 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 DDX49Q9Y6V7 483 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 SALL3Q9BXA9 1300 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 A0A1W2PPW3 197 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TCRBV5S2A0A599 114 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ENO4A6NNW6 628 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 FAM86B1E9PN63 330 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 OLFM2O95897 454 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ALDOAP04075 364 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 FAM86B2P0C5J1 330 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 STAG3L1P0CL83 205 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CYP2C9P11712 490 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 MMP9P14780 707 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 FAHP16930 419 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CAPN2P17655 700 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 KCNA5P22460 613 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TGM1P22735 817 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 EEF1B2P24534 225 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 DNAJB1P25685 340 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CTNNA2P26232 953 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CCND3P30281 292 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 SDHAP31040 664 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SOX6P35712 828 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 PBX1P40424 430 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 BCAP31P51572 246 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SRP54P61011 504 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 GBE1Q04446 702 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 DMWDQ09019 674 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CSTF3Q12996 717 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 KIR3DS1Q14943 382 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CAVIN4Q5BKX8 364 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ZNF667Q5HYK9 610 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 NOMO2Q5JPE7 1267 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 DAB2IPQ5VWQ8 1189 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TBC1D9BQ66K14 1250 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ZCCHC12Q6PEW1 402 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 RANBP10Q6VN20 620 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TMPRSS7Q7RTY8 843 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 C4orf19Q8IY42 314 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 DRAXINQ8NBI3 349 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 PDZD8Q8NEN9 1154 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CACTINQ8WUQ7 758 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 C17orf50Q8WW18 174 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 C5orf30Q96GV9 206 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 PEX11GQ96HA9 241 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 INTS4Q96HW7 963 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 TRIB1Q96RU8 372 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SMC6Q96SB8 1091 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 DDOQ99489 341 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SSX3Q99909 188 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CCDC77Q9BR77 488 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SPATA5L1Q9BVQ7 753 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SLC46A2Q9BY10 475 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 PRRG4Q9BZD6 226 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ACPTQ9BZG2 426 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TRIM2Q9C040 744 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 NRSN2Q9GZP1 204 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms