RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 RABEPKQ7Z6M1 372 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 ZC3H18Q86VM9 953 aaKnown RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 SLC13A5Q86YT5 568 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 NDUFAF2Q8N183 169 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 AADATQ8N5Z0 425 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 SUMF1Q8NBK3 374 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 OR2T34Q8NGX1 318 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 OR14C36Q8NHC7 312 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 ACTL9Q8TC94 416 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 GRIN3AQ8TCU5 1115 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 HTR3CQ8WXA8 447 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 ERLEC1Q96DZ1 483 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 TEKT5Q96M29 485 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 KLHL32Q96NJ5 620 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 NAP1L3Q99457 506 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 PREBQ9HCU5 417 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 NT5MQ9NPB1 228 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 HOMER3Q9NSC5 361 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 SAE1Q9UBE0 346 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 MBD1Q9UIS9 605 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 TTC7AQ9ULT0 858 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 PYCARDQ9ULZ3 195 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 FANCMQ8IYD8 2048 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 TBC1D3DA0A087WVF3 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3IA0A087WXS9 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3EA0A087X179 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3KA0A087X1G2 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TSPAN11A1L157 253 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CFAP69A5D8W1 941 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3FA6NER0 549 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 METTL12A8MUP2 240 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 C10orf142B7Z368 130 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3LB9A6J9 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 KIF2AO00139 706 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 KCNK1O00180 336 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TRAFD1O14545 582 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 MUSKO15146 869 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 HTRA2O43464 458 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TSPAN6O43657 245 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 FOXD2O60548 495 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 LRP3O75074 770 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 STK10O94804 968 aaKnown RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3HP0C7X1 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 ADRB3P13945 408 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TCP1P17987 556 aaKnown RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 BCKDHBP21953 392 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 XPAP23025 273 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 GKP32189 559 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 ACSL1P33121 698 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 RGRP47804 291 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CCR5P51681 352 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 ADPRHP54922 357 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 EIF3EP60228 445 aaKnown RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 RPL26P61254 145 aaKnown RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 GNG11P61952 73 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 ITKQ08881 620 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 ELP6Q0PNE2 266 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CNTN1Q12860 1018 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 SRSF5Q13243 272 aaKnown RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 ZNF211Q13398 564 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 SLC14A2Q15849 920 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CCNG2Q16589 344 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 UGP2Q16851 508 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 PIP5KL1Q5T9C9 394 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 AGBL4Q5VU57 503 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 LYSMD4Q5XG99 296 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3GQ6DHY5 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3CQ6IPX1 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 AADACL2Q6P093 401 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 DRICH1Q6PGQ1 229 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 DARS2Q6PI48 645 aaKnown RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TTC7BQ86TV6 843 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 PRPF39Q86UA1 669 aaKnown RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CACUL1Q86Y37 369 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CAMK1DQ8IU85 385 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CDKL3Q8IVW4 592 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TMEFF1Q8IYR6 380 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 TBC1D3Q8IZP1 549 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 SLC35F6Q8N357 371 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 PGBD5Q8N414 524 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 FAM160A2Q8N612 972 aaPredicted RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 GPR161Q8N6U8 529 aaKnown RBP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CNTD1Q8N815 330 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 FRMD1Q8N878 549 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 OR6K2Q8NGY2 324 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 CEP76Q8TAP6 659 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 DNASE2BQ8WZ79 361 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 RUBCNQ92622 972 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 VOPP1Q96AW1 172 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 ARRDC3Q96B67 414 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 ECHDC3Q96DC8 303 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 FEM1CQ96JP0 617 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 EXOC2Q96KP1 924 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 PPP1R2P1Q96PQ5 205 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 QKIQ96PU8 341 aaKnown RBP eCLIP6.83□□□□□ -1.32
UBBP1-201ENST00000392399 SEMA3CQ99985 751 aa6.83□□□□□ -1.32
UBBP1-201ENST00000392399 HERPUD2Q9BSE4 406 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms