RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 TAP1Q03518 808 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 MRPL49Q13405 166 aaKnown RBP6.6□□□□□ -1.35
TRAV35-201ENST00000390462 TOP3AQ13472 1001 aaPredicted RBP6.6□□□□□ -1.35
TRAV35-201ENST00000390462 BYSLQ13895 437 aaKnown RBP6.6□□□□□ -1.35
TRAV35-201ENST00000390462 RUNX2Q13950 521 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 E2F2Q14209 437 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 ANKS6Q68DC2 871 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 HEPHL1Q6MZM0 1159 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 TAPT1Q6NXT6 567 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 C16orf89Q6UX73 402 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 MIER3Q7Z3K6 550 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 FAM83AQ86UY5 434 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 KLHL7Q8IXQ5 586 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 CMTM4Q8IZR5 234 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 METTL25Q8N6Q8 603 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 SIRT6Q8N6T7 355 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 NEK11Q8NG66 645 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 OR52K2Q8NGK3 314 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 BCAS4Q8TDM0 211 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 SLC13A3Q8WWT9 602 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 SHISA4Q96DD7 197 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 LIN37Q96GY3 246 aaPredicted RBP6.6□□□□□ -1.35
TRAV35-201ENST00000390462 PRR11Q96HE9 360 aaPredicted RBP6.6□□□□□ -1.35
TRAV35-201ENST00000390462 CAMK1GQ96NX5 476 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 CLIC6Q96NY7 704 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 OR2A14Q96R47 310 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 CTAGE1Q96RT6 745 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 PLK3Q9H4B4 646 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 DENND2DQ9H6A0 471 aaPredicted RBP6.6□□□□□ -1.35
TRAV35-201ENST00000390462 SLC35D1Q9NTN3 355 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 STEAP1Q9UHE8 339 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 VAV3Q9UKW4 847 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 SORCS3Q9UPU3 1222 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 COL16A1Q07092 1604 aaPredicted RBP6.6□□□□□ -1.35
TRAV35-201ENST00000390462 SETBP1Q9Y6X0 1596 aa6.6□□□□□ -1.35
TRAV35-201ENST00000390462 CLIP1P30622 1438 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 FAM135BQ49AJ0 1406 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 UBR1Q8IWV7 1749 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 ZNF644Q9H582 1327 aaPredicted RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 SMIM30A4D0T7 59 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 OOEPA6NGQ2 149 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 B5MCH6 92 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 TRIM24O15164 1050 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 LETM1O95202 739 aaPredicted RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 CSF1RP07333 972 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 SRPRAP08240 638 aaKnown RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 TMEM225BP0DP42 221 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 PDGFRAP16234 1089 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 TMEM11P17152 192 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 RPS6KA3P51812 740 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 DGKQP52824 942 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 ADARP55265 1226 aaKnown RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 SNU13P55769 128 aaKnown RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 ITGA1P56199 1179 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 BPIFB4P59827 614 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 BMPR2Q13873 1038 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 CBFBQ13951 182 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 RTP5Q14D33 572 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 RAB3GAP1Q15042 981 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 SLC18A3Q16572 532 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 AASDHQ4L235 1098 aaPredicted RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 GAGE13Q4V321 117 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 TIGD5Q53EQ6 642 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 DAB2IPQ5VWQ8 1189 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 MCTP1Q6DN14 999 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 KLHL10Q6JEL2 608 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 RGS7BPQ6MZT1 257 aaPredicted RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 DPY19L2P1Q6NXN4 242 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 GJB7Q6PEY0 223 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 C17orf99Q6UX52 265 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 PPP1R21Q6ZMI0 780 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 LARP4Q71RC2 724 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 TADA2BQ86TJ2 420 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 AACSQ86V21 672 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 DZIP1Q86YF9 867 aaKnown RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 MAML2Q8IZL2 1156 aaPredicted RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 FBXW8Q8N3Y1 598 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 KDM1BQ8NB78 822 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 NHLRC2Q8NBF2 726 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 RBM15BQ8NDT2 890 aaKnown RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 RASSF8Q8NHQ8 419 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 MAFAQ8NHW3 353 aaPredicted RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 PTPMT1Q8WUK0 201 aaPredicted RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 TEKT4Q8WW24 435 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 LRRC59Q96AG4 307 aaKnown RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 MISP3Q96FF7 219 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 ELMOD3Q96FG2 381 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 TRMT61AQ96FX7 289 aaKnown RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 ZSWIM3Q96MP5 696 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 WRNIP1Q96S55 665 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 PIMREGQ9BSJ6 248 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 CACNG6Q9BXT2 260 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 GLIS2Q9BZE0 524 aaPredicted RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 GPR88Q9GZN0 384 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 SMOC2Q9H3U7 446 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 USP29Q9HBJ7 922 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 SLC22A11Q9NSA0 550 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 MTMR4Q9NYA4 1195 aa6.59□□□□□ -1.35
TRAV35-201ENST00000390462 COPG1Q9Y678 874 aaKnown RBP6.59□□□□□ -1.35
TRAV35-201ENST00000390462 CLCA3PQ9Y6N3 262 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms