RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MLNP12872 115 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 HGFP14210 728 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 ADAM17P78536 824 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 ARHGAP36Q6ZRI8 547 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 NDRG1Q92597 394 aaKnown RBP14.37□□□□□ -0.11
RTF1-201ENST00000389629 AGAP2Q99490 1192 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 OSMRQ99650 979 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 CHRAC1Q9NRG0 131 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 SIRPGQ9P1W8 387 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.37□□□□□ -0.11
RTF1-201ENST00000389629 TRIM24O15164 1050 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 SLC26A2P50443 739 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 PGS1Q32NB8 556 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 SPANXN2Q5MJ10 180 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 NEPROQ6NW34 567 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 NAT16Q8N8M0 369 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 UBASH3BQ8TF42 649 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 MTERF3Q96E29 417 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 QKIQ96PU8 341 aaKnown RBP eCLIP14.37□□□□□ -0.112e-7■■■■■ 28.9
RTF1-201ENST00000389629 EPB41L1Q9H4G0 881 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 EVPLLA8MZ36 301 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 CLIC3O95833 236 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 PRDX6P30041 224 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 SOX6P35712 828 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 SNX17Q15036 470 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 PIGZQ86VD9 579 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 PLEKHA8Q96JA3 519 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 TWNKQ96RR1 684 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 TBL1YQ9BQ87 522 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 SPATC1LQ9H0A9 340 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 TBC1D13Q9NVG8 400 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 KATNA1O75449 491 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 CDK9P50750 372 aaKnown RBP14.36□□□□□ -0.11
RTF1-201ENST00000389629 RAB10P61026 200 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 ENPEPQ07075 957 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 TNK2Q07912 1038 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 CCDC88AQ3V6T2 1871 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 VPS26BQ4G0F5 336 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 EFL1Q7Z2Z2 1120 aaKnown RBP14.36□□□□□ -0.11
RTF1-201ENST00000389629 PHC3Q8NDX5 983 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 WNT8BQ93098 351 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 UNC93B1Q9H1C4 597 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 NT5MQ9NPB1 228 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 HPS4Q9NQG7 708 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 CACNA2D2Q9NY47 1150 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 TPRKBQ9Y3C4 175 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 GMEB1Q9Y692 573 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 AKAP14Q86UN6 197 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 NXNL1Q96CM4 212 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 SLC39A3Q9BRY0 314 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 TLE6Q9H808 572 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 ENTPD7Q9NQZ7 604 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 FAM159BA6NKW6 160 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 KCNH1O95259 989 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 ATG7O95352 703 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
RTF1-201ENST00000389629 LBPP18428 481 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 NOS2P35228 1153 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 GRM3Q14832 879 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 MRNIPQ6NTE8 343 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 CCDC185Q8N715 623 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 CNTD1Q8N815 330 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 SEPT8Q92599 483 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 ZHX1-C8orf76Q96EF9 292 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 FAM120BQ96EK7 910 aaKnown RBP14.36□□□□□ -0.11
RTF1-201ENST00000389629 MCRS1Q96EZ8 462 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 ULBP1Q9BZM6 244 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 ZNF556Q9HAH1 456 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 RGS18Q9NS28 235 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 U3KQV3 271 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 SF3B1O75533 1304 aaKnown RBP eCLIP14.36□□□□□ -0.112e-6■■■■■ 109.9
RTF1-201ENST00000389629 SLC25A27O95847 323 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 LIMK2P53671 638 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 IRF9Q00978 393 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 LRRC74AQ0VAA2 488 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 MSLNQ13421 630 aaPredicted RBP14.36□□□□□ -0.11
RTF1-201ENST00000389629 ARMCX4Q5H9R4 360 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 CANT1Q8WVQ1 401 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 VPS33AQ96AX1 596 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 PLK2Q9NYY3 685 aa14.36□□□□□ -0.11
RTF1-201ENST00000389629 A0A0J9YYE9 177 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 E7ESA3 106 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 PTPRAP18433 802 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 POU1F1P28069 291 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 GPD2P43304 727 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 CLEC6AQ6EIG7 209 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 PAOXQ6QHF9 649 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 FNDC8Q8TC99 324 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 PPP1R2P1Q96PQ5 205 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 TRIM62Q9BVG3 475 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 SMPD3Q9NY59 655 aaPredicted RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 CLDN25C9JDP6 229 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 BUD23O43709 281 aaKnown RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 ZNF37AP17032 561 aaPredicted RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 AKT1P31749 480 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 ZNF460Q14592 562 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 PAN2Q504Q3 1202 aaKnown RBP14.35□□□□□ -0.11
RTF1-201ENST00000389629 TAS1R3Q7RTX0 852 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 CUZD1Q86UP6 607 aa14.35□□□□□ -0.11
RTF1-201ENST00000389629 TKTL2Q9H0I9 626 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms