RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CXCL17Q6UXB2 119 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 ZNF438Q7Z4V0 828 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 SYT12Q8IV01 421 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 ACMSDQ8TDX5 336 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 MARK4Q96L34 752 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 SERPINB11Q96P15 392 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 LRRC19Q9H756 370 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 TIMM13Q9Y5L4 95 aaPredicted RBP14.1□□□□□ -0.15
SNPH-201ENST00000381867 BTN3A3O00478 584 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 RAMP2O60895 175 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 UQCRBP14927 111 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 CAPSQ13938 189 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 PLCL1Q15111 1095 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 HIPK1Q86Z02 1210 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 ALLCQ8N6M5 410 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 ZNF540Q8NDQ6 660 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 BAP1Q92560 729 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 GPR20Q99678 358 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 SLC4A5Q9BY07 1137 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 RPS6KA6Q9UK32 745 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 FBXL21Q9UKT6 434 aa14.1□□□□□ -0.15
SNPH-201ENST00000381867 TNPO3Q9Y5L0 923 aaKnown RBP14.1□□□□□ -0.15
SNPH-201ENST00000381867 SMIM22K7EJ46 135 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 KCNK1O00180 336 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 CYP1A2P05177 515 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 PSMD4P55036 377 aaKnown RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 SLC6A3Q01959 620 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 ENPEPQ07075 957 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 LGALS3BPQ08380 585 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 ADIGQ0VDE8 80 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 DDI2Q5TDH0 399 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 NIFKQ9BYG3 293 aaKnown RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 OSGEPL1Q9H4B0 414 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 CLN6Q9NWW5 311 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 OPTCQ9UBM4 332 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 ING4Q9UNL4 249 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 HBS1LQ9Y450 684 aaKnown RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 HMGB3O15347 200 aaKnown RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 MMP3P08254 477 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 FLT3LGP49771 235 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 GPSM1Q86YR5 675 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 COPS5Q92905 334 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 MAGEB10Q96LZ2 347 aaPredicted RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 PRKAG3Q9UGI9 489 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 A0A0U1RQJ8 604 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 SPATA31C1P0DKV0 1188 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 NAGLUP54802 743 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 LSM3P62310 102 aaKnown RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 INTS11Q5TA45 600 aaKnown RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 FAM171A1Q5VUB5 890 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 MCOLN3Q8TDD5 553 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 SERAC1Q96JX3 654 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 IL22Q9GZX6 179 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNPH-201ENST00000381867 SEMA4BQ9NPR2 832 aaPredicted RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 VPS45Q9NRW7 570 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 ATP5F1P24539 256 aaPredicted RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 PPM1AP35813 382 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 MAPKAPK2P49137 400 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 BNC1Q01954 994 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 LRRC38Q5VT99 294 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 WDR59Q6PJI9 974 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 SPESP1Q6UW49 350 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 EIF3MQ7L2H7 374 aaKnown RBP14.09□□□□□ -0.15
SNPH-201ENST00000381867 POLNQ7Z5Q5 900 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 DEPDC4Q8N2C3 294 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 LRRC52Q8N7C0 313 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 CAPNS2Q96L46 248 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 Q96MT0 163 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 PIGUQ9H490 435 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 IKZF3Q9UKT9 509 aa14.09□□□□□ -0.15
SNPH-201ENST00000381867 KLRC4O43908 158 aa14.08□□□□□ -0.15
SNPH-201ENST00000381867 COX7A2P14406 83 aa14.08□□□□□ -0.15
SNPH-201ENST00000381867 CYP2C18P33260 490 aa14.08□□□□□ -0.15
SNPH-201ENST00000381867 CBWD6Q4V339 395 aa14.08□□□□□ -0.15
SNPH-201ENST00000381867 C18orf25Q96B23 403 aaPredicted RBP14.08□□□□□ -0.15
SNPH-201ENST00000381867 ZNF558Q96NG5 402 aa14.08□□□□□ -0.15
SNPH-201ENST00000381867 ATXN3LQ9H3M9 355 aa14.08□□□□□ -0.15
SNPH-201ENST00000381867 TMCO1Q9UM00 188 aa14.08□□□□□ -0.15
SNPH-201ENST00000381867 R3HDM2Q9Y2K5 976 aaKnown RBP14.08□□□□□ -0.15
SNPH-201ENST00000381867 UBE2QL1A1L167 161 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 ANKRD63C9JTQ0 380 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 F8VP50 259 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 ZNF37AP17032 561 aaPredicted RBP14.08□□□□□ -0.16
SNPH-201ENST00000381867 NPR3P17342 541 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 AKAP14Q86UN6 197 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 LRRC17Q8N6Y2 441 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 MAGEC3Q8TD91 643 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 TMEM159Q96B96 161 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 ST6GALNAC4Q9H4F1 302 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 CMTM6Q9NX76 183 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 OR6B1O95007 311 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 BMP10O95393 424 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 ACAT1P24752 427 aaKnown RBP14.08□□□□□ -0.16
SNPH-201ENST00000381867 MMP13P45452 471 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 PYDC2Q56P42 97 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 C16orf62Q7Z3J2 963 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 GLT6D1Q7Z4J2 308 aa14.08□□□□□ -0.16
SNPH-201ENST00000381867 OFCC1Q8IZS5 231 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms