RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RPL22P35268 128 aaKnown RBP12.58□□□□□ -0.4
VRK3-202ENST00000377011 CCNG1P51959 295 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 GPX6P59796 221 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 RING1Q06587 406 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 E2F5Q15329 346 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 CRY1Q16526 586 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 SLC45A4Q5BKX6 768 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 ZNF513Q8N8E2 541 aaPredicted RBP12.58□□□□□ -0.4
VRK3-202ENST00000377011 MDGA1Q8NFP4 955 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 OR52K2Q8NGK3 314 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 LRRC37BQ96QE4 947 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 VPS11Q9H270 941 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 METTL5Q9NRN9 209 aaKnown RBP12.58□□□□□ -0.4
VRK3-202ENST00000377011 ASNSD1Q9NWL6 643 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 INTS6Q9UL03 887 aaKnown RBP12.58□□□□□ -0.4
VRK3-202ENST00000377011 MMP17Q9ULZ9 603 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 ZNF510Q9Y2H8 683 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 C15orf41Q9Y2V0 281 aa12.58□□□□□ -0.4
VRK3-202ENST00000377011 M0QYT0 321 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 SPAG7O75391 227 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 RNF8O76064 485 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ANP32DO95626 131 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 KRT16P08779 473 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 RPA3P35244 121 aaPredicted RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 TNFRSF4P43489 277 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 DNAJC3Q13217 504 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 TFDP2Q14188 446 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 C15orf59Q2T9L4 293 aaPredicted RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 MS4A13Q5J8X5 152 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 EFHC1Q5JVL4 640 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ANO7Q6IWH7 933 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ADIPOR2Q86V24 386 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ARFGAP1Q8N6T3 406 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ZNF366Q8N895 744 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 MZB1Q8WU39 189 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 CYB5D2Q8WUJ1 264 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 C10orf82Q8WW14 230 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 RLN3Q8WXF3 142 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 IGSF8Q969P0 613 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 NT5C3BQ969T7 300 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 MIEF2Q96C03 454 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 TMA16Q96EY4 203 aaKnown RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 CYTH2Q99418 400 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 PAFAH2Q99487 392 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 TUBB6Q9BUF5 446 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 MTG2Q9H4K7 406 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 SAR1AQ9NR31 198 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ABCB8Q9NUT2 735 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 SLC8A2Q9UPR5 921 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 PCDHGA2Q9Y5H1 932 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 IQANK1A0A1B0GTG1 560 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 CFAP69A5D8W1 941 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 ZNF487B1APH4 448 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 TROVE2P10155 538 aaKnown RBP eCLIP12.57□□□□□ -0.4
VRK3-202ENST00000377011 TACR2P21452 398 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 IL1R2P27930 398 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 MATKP42679 507 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 IL12RB1P42701 662 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 SULT1E1P49888 294 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ZNF143P52747 638 aaPredicted RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 EIF3EP60228 445 aaKnown RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 MRPS21P82921 87 aaKnown RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 C4orf22Q6V702 233 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 FAM47EQ6ZV65 393 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 BNIPLQ7Z465 357 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 CHSY1Q86X52 802 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 LGI2Q8N0V4 545 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 FAM160A2Q8N612 972 aaPredicted RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 KCTD6Q8NC69 237 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ZNF75CPQ92670 426 aaPredicted RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 HAUS1Q96CS2 278 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 PAIP2Q9BPZ3 127 aaKnown RBP12.57□□□□□ -0.4
VRK3-202ENST00000377011 MYLK2Q9H1R3 596 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 ZWILCHQ9H900 591 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 SLC27A6Q9Y2P4 619 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 HS3ST4Q9Y661 456 aa12.57□□□□□ -0.4
VRK3-202ENST00000377011 GSTA2P09210 222 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 HLA-EP13747 358 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 KRT4P19013 534 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 BCKDHBP21953 392 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 PRKCHP24723 683 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 NOS2P35228 1153 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 CLNS1AP54105 237 aaKnown RBP12.56□□□□□ -0.4
VRK3-202ENST00000377011 LMAN2Q12907 356 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 NOMO1Q15155 1222 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 SLC1A5Q15758 541 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 SEPT7Q16181 437 aaKnown RBP12.56□□□□□ -0.4
VRK3-202ENST00000377011 PTPRNQ16849 979 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 CCDC14Q49A88 953 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 MPPE1Q53F39 396 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 FBXL22Q6P050 247 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 LVRNQ6Q4G3 990 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 C3orf62Q6ZUJ4 267 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 WDR5BQ86VZ2 330 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 LONP2Q86WA8 852 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 RFX6Q8HWS3 928 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 UNC45BQ8IWX7 931 aa12.56□□□□□ -0.4
VRK3-202ENST00000377011 PALM2Q8IXS6 379 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms