RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 EFNA1P20827 205 aaPredicted RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 AKT1P31749 480 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SLC34A1Q06495 639 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 MED21Q13503 144 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 RBM23Q86U06 439 aaKnown RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 ATP6V0D2Q8N8Y2 350 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 NCLNQ969V3 563 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 EME1Q96AY2 570 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 MLPHQ9BV36 600 aaPredicted RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.78□□□□□ -0.523e-12■■■■□ 22.7
DDR1-227ENST00000376570 NUMBLQ9Y6R0 609 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 TRIP12Q14669 1992 aaPredicted RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 LY75O60449 1722 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 TBX10O75333 385 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 AP2A1O95782 977 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 ATP6V1C1P21283 382 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SERPINH1P50454 418 aaKnown RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 NEK3P51956 506 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 CAPRIN1Q14444 709 aaKnown RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 SMYD5Q6GMV2 418 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SZRD1Q7Z422 152 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 PTGR2Q8N8N7 351 aaPredicted RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 OR4K2Q8NGD2 314 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 GABPB2Q8TAK5 448 aaPredicted RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 SOCS4Q8WXH5 440 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 ENTPD7Q9NQZ7 604 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SOX13Q9UN79 622 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SLC30A1Q9Y6M5 507 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SEPT4O43236 478 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 DNAJA2O60884 412 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 GLP2RO95838 553 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 GM2AP17900 193 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 RHOAP61586 193 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 PPP1R8Q12972 351 aaKnown RBP11.77□□□□□ -0.52
DDR1-227ENST00000376570 PTPRNQ16849 979 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 PLA2G4EQ3MJ16 856 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 GRTP1Q5TC63 336 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 KRT80Q6KB66 452 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 RASAL3Q86YV0 1011 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 MAB21L3Q8N8X9 362 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 CLHC1Q8NHS4 586 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 HEXDCQ8WVB3 486 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 UTP4Q969X6 686 aaKnown RBP11.77□□□□□ -0.52
DDR1-227ENST00000376570 ULK4Q96C45 1275 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 CMTM5Q96DZ9 223 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 CDK15Q96Q40 435 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 ACOX2Q99424 681 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 CENPKQ9BS16 269 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 TLR9Q9NR96 1032 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 GNEQ9Y223 722 aaKnown RBP11.77□□□□□ -0.52
DDR1-227ENST00000376570 EFR3BQ9Y2G0 817 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 ZNF711Q9Y462 761 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 PPME1Q9Y570 386 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.52
DDR1-227ENST00000376570 ARID1BQ8NFD5 2236 aaPredicted RBP11.77□□□□□ -0.53
DDR1-227ENST00000376570 FAM149AA5PLN7 773 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 I6L893 689 aaPredicted RBP11.77□□□□□ -0.53
DDR1-227ENST00000376570 GABRB2P47870 512 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 GSSP48637 474 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 ACLYP53396 1101 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 SPANXN3Q5MJ09 141 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 FBXL22Q6P050 247 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 CYP4V2Q6ZWL3 525 aaPredicted RBP11.77□□□□□ -0.53
DDR1-227ENST00000376570 GLT6D1Q7Z4J2 308 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 PCSK9Q8NBP7 692 aaKnown RBP11.77□□□□□ -0.53
DDR1-227ENST00000376570 DNAJB14Q8TBM8 379 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 PCDHAC1Q9H158 963 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 FCF1Q9Y324 198 aaKnown RBP11.77□□□□□ -0.53
DDR1-227ENST00000376570 KCNU1A8MYU2 1149 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 ENPP3O14638 875 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 LINGO3P0C6S8 592 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 T-ENOLP0DO92 83 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 RENBPP51606 427 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 CYLC2Q14093 348 aaPredicted RBP11.77□□□□□ -0.53
DDR1-227ENST00000376570 PRKD1Q15139 912 aaPredicted RBP11.77□□□□□ -0.53
DDR1-227ENST00000376570 TMPRSS6Q8IU80 811 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 B4GALNT2Q8NHY0 566 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 TEKT5Q96M29 485 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 CIPCQ9C0C6 399 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 IL22Q9GZX6 179 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.53
DDR1-227ENST00000376570 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 MORF4L1Q9UBU8 362 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 LRCH1Q9Y2L9 728 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 PKP3Q9Y446 797 aa11.77□□□□□ -0.53
DDR1-227ENST00000376570 A0A1B0GVG6 124 aa11.76□□□□□ -0.53
DDR1-227ENST00000376570 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
DDR1-227ENST00000376570 SERPINF2P08697 491 aa11.76□□□□□ -0.53
DDR1-227ENST00000376570 CD1EP15812 388 aa11.76□□□□□ -0.53
DDR1-227ENST00000376570 SMAD3P84022 425 aaKnown RBP11.76□□□□□ -0.53
DDR1-227ENST00000376570 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
DDR1-227ENST00000376570 PPP1R3AQ16821 1122 aa11.76□□□□□ -0.53
DDR1-227ENST00000376570 RNF219Q5W0B1 726 aaPredicted RBP11.76□□□□□ -0.53
DDR1-227ENST00000376570 TLDC1Q6P9B6 456 aa11.76□□□□□ -0.53
DDR1-227ENST00000376570 FAM151BQ6UXP7 276 aa11.76□□□□□ -0.53
DDR1-227ENST00000376570 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
DDR1-227ENST00000376570 TMEM86AQ8N2M4 240 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms