RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CARM1Q86X55 608 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 TXNDC5Q8NBS9 432 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 GBA3Q9H227 469 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 CYP4F12Q9HCS2 524 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 ANKRD6Q9Y2G4 727 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 MT-CO1P00395 513 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 HOXA11P31270 313 aaPredicted RBP14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 NOS2P35228 1153 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 NPY2RP49146 381 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 TXNL4AP83876 142 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 AGKQ53H12 422 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 BEST2Q8NFU1 509 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 SPATA22Q8NHS9 363 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 CD99L2Q8TCZ2 262 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 NT5C3BQ969T7 300 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 CELF6Q96J87 481 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 SNX27Q96L92 541 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 SLC39A3Q9BRY0 314 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 OSBPL2Q9H1P3 480 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 CNOT11Q9UKZ1 510 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 PADI4Q9UM07 663 aa14.26□□□□□ -0.13
CLCNKA-202ENST00000375692 SHROOM3Q8TF72 1996 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 MAGEB16A2A368 324 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 H3BNH8 94 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 NRP1O14786 923 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 DAB1O75553 588 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 TIPRLO75663 272 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 HOXD8P13378 290 aaPredicted RBP14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 TPI1P60174 286 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 PRAMEP78395 509 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 RHDQ02161 417 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 LRP8Q14114 963 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 FRG1Q14331 258 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 POU6F1Q14863 301 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 KRT80Q6KB66 452 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 KLHL35Q6PF15 583 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 PNPLA1Q8N8W4 532 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 WNT8BQ93098 351 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 PPWD1Q96BP3 646 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 HAUS8Q9BT25 410 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 NXF3Q9H4D5 531 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 POMKQ9H5K3 350 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 CACNA2D2Q9NY47 1150 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 THEGQ9P2T0 379 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 MRPL42Q9Y6G3 142 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 CROCCQ5TZA2 2017 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 FYNP06241 537 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 C8BP07358 591 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 ALDH3B2P48448 385 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 HK2P52789 917 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 GJA9P57773 515 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 LPIN1Q14693 890 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 GRIK4Q16099 956 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 ADRM1Q16186 407 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 FBXO47Q5MNV8 452 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 REP15Q6BDI9 236 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 TRIM67Q6ZTA4 783 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 RNF135Q8IUD6 432 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 ERI1Q8IV48 349 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 PELI3Q8N2H9 469 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 LRRC52Q8N7C0 313 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 SPPL2BQ8TCT7 592 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 MAELQ96JY0 434 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 FAM210AQ96ND0 272 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 UNC93B1Q9H1C4 597 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 CIDEBQ9UHD4 219 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 SFMBT1Q9UHJ3 866 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 MYRFQ9Y2G1 1151 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 ZNF236Q9UL36 1845 aa14.25□□□□□ -0.13
CLCNKA-202ENST00000375692 MYL3P08590 195 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CCDC166P0CW27 439 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 HSPA1AP0DMV8 641 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 HSPA1BP0DMV9 641 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 KCNA5P22460 613 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CDK9P50750 372 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CLCN2P51788 898 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 PLK1P53350 603 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 C1QTNF8P60827 252 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 RAB10P61026 200 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CACNB2Q08289 660 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 ESRP1Q6NXG1 681 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 TRIM74Q86UV6 250 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 TRIM73Q86UV7 250 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 OR9I1Q8NGQ6 314 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 HEXDCQ8WVB3 486 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 OSBPL11Q9BXB4 747 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CDHR5Q9HBB8 845 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 SUCOQ9UBS9 1254 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 SLC2A6Q9UGQ3 507 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 GMEB1Q9Y692 573 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 FAM95CA0A1B0GW59 222 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 ZNF839A8K0R7 811 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 SOCS2O14508 198 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 TRIM24O15164 1050 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 HTRA2O43464 458 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 FOXD2O60548 495 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 MT-CYBP00156 380 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CYBAP13498 195 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 IGFBP6P24592 240 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CCND3P30281 292 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms