RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RIPOR1Q6ZS17 1223 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 C12orf50Q8NA57 414 aaPredicted RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 OR56A4Q8NGH8 313 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 PAAF1Q9BRP4 392 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 A0A1W2PQ45 241 aaPredicted RBP18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 A0A1W2PQY0 241 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 C5orf60A6NFR6 353 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 FFAR3O14843 346 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 GPR42O15529 346 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 UBTFL6P0CB48 400 aaPredicted RBP18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 CYP2A7P20853 494 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 SEMG2Q02383 582 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 FBXO48Q5FWF7 155 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 ELMO1Q92556 727 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 CASP10Q92851 521 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 VPS50Q96JG6 964 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 RBBP8Q99708 897 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 TCF25Q9BQ70 676 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 VPS45Q9NRW7 570 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 OPTCQ9UBM4 332 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 KLQ9UEF7 1012 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 AP2A1O95782 977 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 DRD4P21917 467 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 EPHA3P29320 983 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 YBEYP58557 167 aaPredicted RBP18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 PLOD1Q02809 727 aaPredicted RBP18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 IL27RAQ6UWB1 636 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 OLFML1Q6UWY5 402 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC35B2Q8TB61 432 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 SUSD3Q96L08 255 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 SMOQ99835 787 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 ZNHIT2Q9UHR6 403 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 TCRBV7S3A2A0A539 114 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC38A8A6NNN8 435 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 IRAK2O43187 625 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 CCL5P13501 91 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 VCLP18206 1134 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 ATP5F1P24539 256 aaPredicted RBP18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 ATP6V1E1P36543 226 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 TTPAP49638 278 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 PRMT2P55345 433 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 CYP4F8P98187 520 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 DPYSL2Q16555 572 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 ZDHHC24Q6UX98 284 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 TMPRSS6Q8IU80 811 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 STK40Q8N2I9 435 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 ZNF296Q8WUU4 475 aaPredicted RBP18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 CENPTQ96BT3 561 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 HTATIP2Q9BUP3 242 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 DPY30Q9C005 99 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 FAM124BQ9H5Z6 455 aaPredicted RBP18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 INPP4BO15327 924 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC10A3P09131 477 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 IQCF3P0C7M6 154 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 QPCTQ16769 361 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 B3GNT9Q6UX72 402 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 OOSP2Q86WS3 158 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC9A7Q96T83 725 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 CCSER2Q9H7U1 834 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 DNAJB4Q9UDY4 337 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 RAI2Q9Y5P3 530 aa18.1■□□□□ 0.49
PTPDC1-202ENST00000375360 CITO14578 2027 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 TPSB2P20231 275 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 ALDH9A1P49189 494 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 PKNOX1P55347 436 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 TPSAB1Q15661 275 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 PCDH20Q8N6Y1 951 aaKnown RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 PTPN18Q99952 460 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 FAM126AQ9BYI3 521 aaPredicted RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 CARNS1A5YM72 827 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 AGRPO00253 132 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 PARNO95453 639 aaKnown RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 TSHRP16473 764 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 CYP51A1Q16850 503 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 AGMOQ6ZNB7 445 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 DIS3LQ8TF46 1054 aaKnown RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 FUBP3Q96I24 572 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 CDRT15Q96T59 188 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 ZCCHC2Q9C0B9 1178 aaKnown RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 CRTAC1Q9NQ79 661 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 IGKV6D-21A0A0A0MT36 114 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 TTC24A2A3L6 582 aaPredicted RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 ABCB1P08183 1280 aaPredicted RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 MPP1Q00013 466 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 CREMQ03060 361 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 SEMA5AQ13591 1074 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 CYP2R1Q6VVX0 501 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 RTL3Q8N8U3 475 aaKnown RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 CYP2S1Q96SQ9 504 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 RHOJQ9H4E5 214 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 NMRK1Q9NWW6 199 aa18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 KIAA1522Q9P206 1035 aaPredicted RBP18.09■□□□□ 0.49
PTPDC1-202ENST00000375360 EFCAB14O75071 495 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 ZNF865P0CJ78 1059 aaPredicted RBP18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 CCNCP24863 283 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 PARP15Q460N3 678 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 RAET1GQ6H3X3 334 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 FAM126BQ8IXS8 530 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 CDYL2Q8N8U2 506 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms