RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 THEMIS2Q5TEJ8 643 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 RNF220Q5VTB9 566 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 TMC7Q7Z402 723 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 ARHGAP12Q8IWW6 846 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 ATPAF2Q8N5M1 289 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 OVCA2Q8WZ82 227 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 CLP1Q92989 425 aaKnown RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 CMTM5Q96DZ9 223 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 GBP5Q96PP8 586 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 CDK5RAP1Q96SZ6 601 aaKnown RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 TTC1Q99614 292 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 FNIP2Q9P278 1114 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 PPM1HQ9ULR3 514 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 EME2A4GXA9 379 aaPredicted RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 COCHO43405 550 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 BUD23O43709 281 aaKnown RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 LILRB3O75022 631 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 SIN3BO75182 1162 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 BAG2O95816 211 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 PROCP04070 461 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 PRDX6P30041 224 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 HARS2P49590 506 aaKnown RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 EPHB3P54753 998 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 CREMQ03060 361 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 ZBTB17Q13105 803 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 C16orf46Q6P387 395 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 CASC4Q6P4E1 433 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 PGM2L1Q6PCE3 622 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 PID1Q7Z2X4 250 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 DHDDSQ86SQ9 333 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 CIR1Q86X95 450 aaPredicted RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 TCEAL8Q8IYN2 117 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 RTL3Q8N8U3 475 aaKnown RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 ACTRT2Q8TDY3 377 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 USP33Q8TEY7 942 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 C1orf74Q96LT6 269 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 RAD9AQ99638 391 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 SLC39A8Q9C0K1 460 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 ENTPD7Q9NQZ7 604 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 C2orf78A6NCI8 922 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 ARHGAP42A6NI28 874 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 LYPLA1O75608 230 aaPredicted RBP13.41□□□□□ -0.26
A1CF-204ENST00000373997 CNTN5O94779 1100 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 CXCL14O95715 111 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 TOP3BO95985 862 aaKnown RBP13.41□□□□□ -0.26
A1CF-204ENST00000373997 ITGA2BP08514 1039 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 IRF1P10914 325 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 IDH3AP50213 366 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 RPL26P61254 145 aaKnown RBP13.41□□□□□ -0.26
A1CF-204ENST00000373997 IRX4P78413 519 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 COG7P83436 770 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 RING1Q06587 406 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 RBBP5Q15291 538 aaKnown RBP13.41□□□□□ -0.26
A1CF-204ENST00000373997 ALFQ53S48 1182 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 PLPP4Q5VZY2 271 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 NADSYN1Q6IA69 706 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 FBXL22Q6P050 247 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 DNAJB7Q7Z6W7 309 aaPredicted RBP13.41□□□□□ -0.26
A1CF-204ENST00000373997 ZNF683Q8IZ20 524 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 HERVK_113Q902F9 699 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 IGSF8Q969P0 613 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 TRMT2BQ96GJ1 504 aaKnown RBP13.41□□□□□ -0.26
A1CF-204ENST00000373997 MYRFLQ96LU7 910 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 AGAP3Q96P47 875 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 ZYG11BQ9C0D3 744 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 BRD8Q9H0E9 1235 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 ZNF334Q9HCZ1 680 aaPredicted RBP13.41□□□□□ -0.26
A1CF-204ENST00000373997 ATG2AQ2TAZ0 1938 aa13.41□□□□□ -0.26
A1CF-204ENST00000373997 MAP3K13O43283 966 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 TGM5O43548 720 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 GP5P40197 560 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 KPNA1P52294 538 aaPredicted RBP13.4□□□□□ -0.26
A1CF-204ENST00000373997 ABCE1P61221 599 aaKnown RBP13.4□□□□□ -0.26
A1CF-204ENST00000373997 SLC25A3Q00325 362 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 PDE1BQ01064 536 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 CCDC153Q494R4 210 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 ACAD11Q709F0 780 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 SPRED2Q7Z698 418 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.4□□□□□ -0.26
A1CF-204ENST00000373997 ISL2Q96A47 359 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 RPRD1AQ96P16 312 aaPredicted RBP13.4□□□□□ -0.26
A1CF-204ENST00000373997 SORT1Q99523 831 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 TCF25Q9BQ70 676 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 TRPC7Q9HCX4 862 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 TXNDC16Q9P2K2 825 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 COPG2Q9UBF2 871 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 MEI4A8MW99 385 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 ZBTB24O43167 697 aaPredicted RBP13.4□□□□□ -0.26
A1CF-204ENST00000373997 TACR2P21452 398 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 ERVFC1P60507 584 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 FSCBQ5H9T9 825 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 GRTP1Q5TC63 336 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 C10orf107Q8IVU9 208 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 LZTR1Q8N653 840 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 PHC3Q8NDX5 983 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 OR6Y1Q8NGX8 325 aa13.4□□□□□ -0.26
A1CF-204ENST00000373997 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
A1CF-204ENST00000373997 ARNTL2Q8WYA1 636 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms