RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 MARCOQ9UEW3 520 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 SEPT3Q9UH03 358 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 TBC1D30Q9Y2I9 924 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 CARNS1A5YM72 827 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 G3V2L1 256 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 AURKAO14965 403 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 SLC35E2BP0CK96 405 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 KITP10721 976 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 TARSP26639 723 aaKnown RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 AVPR1AP37288 418 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 CD151P48509 253 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 SLC1A6P48664 564 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 CTC1Q2NKJ3 1217 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 C16orf59Q7L2K0 433 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 OTOP2Q7RTS6 562 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 SETD3Q86TU7 594 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 KIF2BQ8N4N8 673 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 IFT43Q96FT9 208 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 PSKH2Q96QS6 385 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 ACE2Q9BYF1 805 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 NMRAL1Q9HBL8 299 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 TRPC7Q9HCX4 862 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 FBXO6Q9NRD1 293 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 STOML2Q9UJZ1 356 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 TLK1Q9UKI8 766 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 LDB2O43679 373 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 DNAJC6O75061 913 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 HAUS5O94927 633 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 EPOP01588 193 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 RALBP11234 206 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 NQO1P15559 274 aaKnown RBP19.75■□□□□ 0.75
HDAC1-201ENST00000373548 HLA-DPA1P20036 260 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 RGRP47804 291 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 POLD2P49005 469 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 SMAD3P84022 425 aaKnown RBP19.75■□□□□ 0.75
HDAC1-201ENST00000373548 CXorf57Q6NSI4 855 aaKnown RBP19.75■□□□□ 0.75
HDAC1-201ENST00000373548 ATG14Q6ZNE5 492 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 KIAA0408Q6ZU52 694 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 CEP97Q8IW35 865 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 BBS5Q8N3I7 341 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 TMEM199Q8N511 208 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 OR6Y1Q8NGX8 325 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 ARHGEF3Q9NR81 526 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 KCTD3Q9Y597 815 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 DENND4CQ5VZ89 1909 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 SCAMP3O14828 347 aaKnown RBP19.75■□□□□ 0.75
HDAC1-201ENST00000373548 ATP5HO75947 161 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 FGF18O76093 207 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 FGF1P05230 155 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 SERPINF2P08697 491 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 GRK2P25098 689 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 ARRB2P32121 409 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 ARSDP51689 593 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 ITGA9Q13797 1035 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 CYB5D1Q6P9G0 228 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 GPR65Q8IYL9 337 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 ADAMTS19Q8TE59 1207 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 NSMCE3Q96MG7 304 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 DDX50Q9BQ39 737 aaKnown RBP19.75■□□□□ 0.75
HDAC1-201ENST00000373548 CINPQ9BW66 212 aaPredicted RBP19.75■□□□□ 0.75
HDAC1-201ENST00000373548 ZBP1Q9H171 429 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 HAO1Q9UJM8 370 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 MAFFQ9ULX9 164 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 BPTFQ12830 3046 aa19.75■□□□□ 0.75
HDAC1-201ENST00000373548 BAIAP3O94812 1187 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 CBX6O95503 412 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 RAB10P61026 200 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 ELF3P78545 371 aaPredicted RBP19.74■□□□□ 0.75
HDAC1-201ENST00000373548 SLC12A1Q13621 1099 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 GALNT3Q14435 633 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 ZNF460Q14592 562 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 ZNF789Q5FWF6 425 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 CNSTQ6PJW8 725 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 HERC6Q8IVU3 1022 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 CENPLQ8N0S6 344 aaPredicted RBP19.74■□□□□ 0.75
HDAC1-201ENST00000373548 ARL14EPQ8N8R7 260 aaPredicted RBP19.74■□□□□ 0.75
HDAC1-201ENST00000373548 CALML6Q8TD86 181 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 KCTD4Q8WVF5 259 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 PRR11Q96HE9 360 aaPredicted RBP19.74■□□□□ 0.75
HDAC1-201ENST00000373548 TRIB3Q96RU7 358 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 SORT1Q99523 831 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 NOD2Q9HC29 1040 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 PCDHB12Q9Y5F1 795 aa19.74■□□□□ 0.75
HDAC1-201ENST00000373548 CCL22O00626 93 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 SLC7A4O43246 635 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 GREM1O60565 184 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 OLFM2O95897 454 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 CNPP09543 421 aaKnown RBP19.73■□□□□ 0.75
HDAC1-201ENST00000373548 LINC00271P0C7V0 271 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 AQP5P55064 265 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 ZXDBP98169 803 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 ZBTB16Q05516 673 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 RNF219Q5W0B1 726 aaPredicted RBP19.73■□□□□ 0.75
HDAC1-201ENST00000373548 TXNDC8Q6A555 127 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 ITIH5Q86UX2 942 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 TMEM151AQ8N4L1 468 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 HDAC10Q969S8 669 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 ELMO2Q96JJ3 720 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 TASP1Q9H6P5 420 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms