RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 FFAR2O15552 330 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 AQP9O43315 295 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 RNF8O76064 485 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 GJB6O95452 261 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 MT-CO3P00414 261 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 XPAP23025 273 aaPredicted RBP16.34■□□□□ 0.21
VMA21-202ENST00000370361 ACTN2P35609 894 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 ABCG1P45844 678 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 RPIAP49247 311 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 RPL7AP62424 266 aaKnown RBP16.34■□□□□ 0.21
VMA21-202ENST00000370361 PDE1CQ14123 709 aaPredicted RBP16.34■□□□□ 0.21
VMA21-202ENST00000370361 KLHL40Q2TBA0 621 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 ANO6Q4KMQ2 910 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 PLEKHA7Q6IQ23 1121 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 IRF2BP2Q7Z5L9 587 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 SDR16C5Q8N3Y7 309 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 AOPEPQ8N6M6 819 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 OR6K2Q8NGY2 324 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 ATL2Q8NHH9 583 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 CENPTQ96BT3 561 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 HMCESQ96FZ2 354 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 APOLD1Q96LR9 279 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 UCKL1Q9NWZ5 548 aa16.34■□□□□ 0.21
VMA21-202ENST00000370361 UBA2Q9UBT2 640 aaPredicted RBP16.34■□□□□ 0.21
VMA21-202ENST00000370361 TSPAN11A1L157 253 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 CFAP69A5D8W1 941 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 RAD51BO15315 384 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 GIMD1P0DJR0 217 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 MYBL1P10243 752 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 JUNDP17535 347 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 PSMA2P25787 234 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 CSNK1DP48730 415 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 PEX5P50542 639 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 MAMLD1Q13495 774 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 RFTN1Q14699 578 aaPredicted RBP16.33■□□□□ 0.2
VMA21-202ENST00000370361 CFAP58Q5T655 872 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 ATXN7L2Q5T6C5 722 aaPredicted RBP16.33■□□□□ 0.2
VMA21-202ENST00000370361 TMCO4Q5TGY1 634 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 CDCP2Q5VXM1 449 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 ERAP2Q6P179 960 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 MACC1Q6ZN28 852 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 MARCH9Q86YJ5 346 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 PYROXD2Q8N2H3 581 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 HNRNPLLQ8WVV9 542 aaKnown RBP16.33■□□□□ 0.2
VMA21-202ENST00000370361 NAT6Q93015 286 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 SYT11Q9BT88 431 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 LRRC19Q9H756 370 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
VMA21-202ENST00000370361 AIPL1Q9NZN9 384 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 RALYQ9UKM9 306 aaKnown RBP16.33■□□□□ 0.2
VMA21-202ENST00000370361 AP4E1Q9UPM8 1137 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 ACTL7AQ9Y615 435 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 SCINQ9Y6U3 715 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 MYLKQ15746 1914 aa16.33■□□□□ 0.2
VMA21-202ENST00000370361 OPA1O60313 960 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 PRAMEF11O60813 436 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 GKP32189 559 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 EIF2S3P41091 472 aaKnown RBP16.32■□□□□ 0.2
VMA21-202ENST00000370361 PRKCIP41743 596 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 HCAR3P49019 387 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 ACAP1Q15027 740 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 AGERQ15109 404 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 TMEM52BQ4KMG9 183 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 ERMARDQ5T6L9 678 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 C19orf48Q6RUI8 117 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 LZTR1Q8N653 840 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 FGF11Q92914 225 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 IL12RB2Q99665 862 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 SLC13A1Q9BZW2 595 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 ABCG4Q9H172 646 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 MRPL47Q9HD33 250 aaKnown RBP16.32■□□□□ 0.2
VMA21-202ENST00000370361 APOBEC3BQ9UH17 382 aaKnown RBP16.32■□□□□ 0.2
VMA21-202ENST00000370361 LAMA5O15230 3695 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 ITPR1Q14643 2758 aa16.32■□□□□ 0.2
VMA21-202ENST00000370361 TDRD6O60522 2096 aaKnown RBP16.31■□□□□ 0.2
VMA21-202ENST00000370361 EEF2KO00418 725 aaKnown RBP16.31■□□□□ 0.2
VMA21-202ENST00000370361 SPINT1O43278 529 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 DAPK3O43293 454 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 PRPSAP2O60256 369 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 TCEA3O75764 348 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 DXOO77932 396 aaKnown RBP16.31■□□□□ 0.2
VMA21-202ENST00000370361 HTR1BP28222 390 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 SERPINA4P29622 427 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 SEMG2Q02383 582 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
VMA21-202ENST00000370361 NR0B2Q15466 257 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 ASIC2Q16515 512 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 LVRNQ6Q4G3 990 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 FSTL5Q8N475 847 aaPredicted RBP16.31■□□□□ 0.2
VMA21-202ENST00000370361 SCG3Q8WXD2 468 aaKnown RBP16.31■□□□□ 0.2
VMA21-202ENST00000370361 VOPP1Q96AW1 172 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 ZNF578Q96N58 590 aaPredicted RBP16.31■□□□□ 0.2
VMA21-202ENST00000370361 SUV39H2Q9H5I1 410 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 ATP13A3Q9H7F0 1226 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 PDFQ9HBH1 243 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 LHX3Q9UBR4 397 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 ITM2BQ9Y287 266 aa16.31■□□□□ 0.2
VMA21-202ENST00000370361 A0A1W2PQ67 120 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms