RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 OR56A4Q8NGH8 313 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 TMEM40Q8WWA1 233 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 PHF21BQ96EK2 531 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF599Q96NL3 588 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 FBXO6Q9NRD1 293 aaPredicted RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 MOSPD1Q9UJG1 213 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 TBC1D30Q9Y2I9 924 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CRYL1Q9Y2S2 319 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 VWA7Q9Y334 891 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ASB3Q9Y575 518 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 PTGESO14684 152 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 KDM1AO60341 852 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 AOC2O75106 756 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 GLUD1P00367 558 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CHRNA1P02708 482 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 OR56A5P0C7T3 313 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 POLR2EP19388 210 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 MAPK1P28482 360 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF252P-AS1Q0IIN9 211 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 SCAPQ12770 1279 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 RIPK1Q13546 671 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 PDE1CQ14123 709 aaPredicted RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 RFTN1Q14699 578 aaPredicted RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 GRM3Q14832 879 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ZBTB6Q15916 424 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 MPPE1Q53F39 396 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 UBXN11Q5T124 520 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 BEND5Q7L4P6 421 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 PIGWQ7Z7B1 504 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 APLFQ8IW19 511 aaPredicted RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 GLIS1Q8NBF1 620 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 OR4L1Q8NH43 312 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 SPOCK2Q92563 424 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 HDAC10Q969S8 669 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 KLHL5Q96PQ7 755 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ZCCHC2Q9C0B9 1178 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC39A8Q9C0K1 460 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 RNPEPL1Q9HAU8 725 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CHRAC1Q9NRG0 131 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 NMRK1Q9NWW6 199 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 KIAA1522Q9P206 1035 aaPredicted RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 POLG2Q9UHN1 485 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 NRXN2Q9P2S2 1712 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 A0A1W2PQ67 120 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 KANSL1LA0AUZ9 987 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 MAGEA13PA6NCF6 341 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 E7ESA3 106 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CD3EAPO15446 510 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 HCRTO43612 131 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 RNASEH1O60930 286 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 RPP40O75818 363 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CBX6O95503 412 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ESRRBO95718 433 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CYP11A1P05108 521 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ZCCHC18P0CG32 403 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 DGKAP23743 735 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 GABRR2P28476 465 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 FMO4P31512 558 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 RFC2P35250 354 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ABCG1P45844 678 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 GRIA4P48058 902 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 SULT2A1Q06520 285 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 CTBP1Q13363 440 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 MED21Q13503 144 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 TRIP10Q15642 601 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 WLSQ5T9L3 541 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ARMC3Q5W041 872 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 KIAA0930Q6ICG6 404 aaPredicted RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 VPS37AQ8NEZ2 397 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 STYXQ8WUJ0 223 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 DTNBP1Q96EV8 351 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 PRPF18Q99633 342 aaKnown RBP5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 RETREG1Q9H6L5 497 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 COPG2Q9UBF2 871 aa5.36□□□□□ -1.55
SMNDC1-202ENST00000369603 ABHD14A-ACY1A0A1B0GW23 586 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM159BA6NKW6 160 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 A8MUI8 341 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 BTN3A1O00481 513 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC7A4O43246 635 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 LZTS3O60299 673 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 E2F6O75461 281 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 DGKIO75912 1065 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CXCL14O95715 111 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 C1RP00736 705 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 KRT6AP02538 564 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 KRT6BP04259 564 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TFEBP19484 476 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PRKCHP24723 683 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CST5P28325 142 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CTNNB1P35222 781 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 KRT6CP48668 564 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 MAD2L1Q13257 205 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 HIST2H2ACQ16777 129 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TMTC4Q5T4D3 741 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 HIST2H2AA3Q6FI13 130 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PRMT9Q6P2P2 845 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CNKSR3Q6P9H4 555 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CMC1Q7Z7K0 106 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 DSG4Q86SJ6 1040 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 GPSM1Q86YR5 675 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms