RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 NPEPPSL1A6NEC2 478 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 IQCF5A8MTL0 148 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 ZW10O43264 779 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 PCCBP05166 539 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 PIK3CGP48736 1102 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 SLC5A3P53794 718 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 DDI2Q5TDH0 399 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 LDB1Q86U70 411 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-207ENST00000368226 PRELID2Q8N945 189 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 APBB2Q92870 758 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 MFSD14AQ96MC6 490 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 AKAP7Q9P0M2 348 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-207ENST00000368226 NDRG2Q9UN36 371 aaKnown RBP12.99□□□□□ -0.33
PTPRK-207ENST00000368226 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 TSPAN1O60635 241 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 DNTTP04053 509 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 CCL14Q16627 93 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 SLC30A9Q6PML9 568 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 TMPRSS6Q8IU80 811 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 MCRS1Q96EZ8 462 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 ZMAT2Q96NC0 199 aaKnown RBP12.99□□□□□ -0.33
PTPRK-207ENST00000368226 EVLQ9UI08 416 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-207ENST00000368226 MCM8Q9UJA3 840 aa12.99□□□□□ -0.33
PTPRK-207ENST00000368226 NCANO14594 1321 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 TRIM43BA6NCK2 446 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 CCL22O00626 93 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 OR6A2O95222 327 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 TTPAP49638 278 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 RAD23AP54725 363 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 C21orf59P57076 290 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 MRPS35P82673 323 aaKnown RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 SAPCD2Q86UD0 394 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 ARNTL2Q8WYA1 636 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 SCLYQ96I15 445 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 DCLRE1BQ9H816 532 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 MORF4L1Q9UBU8 362 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 LOC102724159A0A0B4J2E5 919 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 CD3EAPO15446 510 aaKnown RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 CAPN1P07384 714 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 PBX3P40426 434 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 PWP2Q15269 919 aaKnown RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 C12orf50Q8NA57 414 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 P2RY11Q96G91 374 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 MAML3Q96JK9 1138 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 ZNF670Q9BS34 389 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 SNX6Q9UNH7 406 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 ZMYM2Q9UBW7 1377 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 LDLRP01130 860 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 PAICSP22234 425 aaKnown RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 ITPKAP23677 461 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 CYP2C18P33260 490 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 RAB10P61026 200 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 FRG1Q14331 258 aaKnown RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 PLEKHA7Q6IQ23 1121 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 KYAT3Q6YP21 454 aaKnown RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 FAM20CQ8IXL6 584 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 OR4L1Q8NH43 312 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 MYO19Q96H55 970 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 KCTD15Q96SI1 283 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 C6orf62Q9GZU0 229 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 HDHD2Q9H0R4 259 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 FAM155BO75949 473 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 ALADP13716 330 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 ATP12AP54707 1039 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 CDK18Q07002 472 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 SPRYD7Q5W111 196 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 WRAP53Q9BUR4 548 aaKnown RBP12.98□□□□□ -0.33
PTPRK-207ENST00000368226 PCDH18Q9HCL0 1135 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 MAT2BQ9NZL9 334 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 OR10H1Q9Y4A9 318 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
PTPRK-207ENST00000368226 FGBP02675 491 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 UGT2B4P06133 528 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 MYBL2P10244 700 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 KPNB1Q14974 876 aaKnown RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 LRRC73Q5JTD7 316 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 DSELQ8IZU8 1212 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 NKAPQ8N5F7 415 aaKnown RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 CLHC1Q8NHS4 586 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 SMG7Q92540 1137 aaKnown RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 RERGQ96A58 199 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ADH1CP00326 375 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 C1RP00736 705 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 FCGR1AP12314 374 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 LPOP22079 712 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 PPM1AP35813 382 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 CDH13P55290 713 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 WNT3AP56704 352 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 C1DQ13901 141 aaKnown RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 PYROXD2Q8N2H3 581 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ZNF276Q8N554 614 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 BDH2Q9BUT1 245 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 XPR1Q9UBH6 696 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ATXN2Q99700 1313 aaKnown RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 A0A088AWK7 358 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 SOWAHBA6NEL2 793 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ARL5CA6NH57 179 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms