RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 EDF1O60869 148 aaKnown RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 UNGP13051 313 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 PBLDP30039 288 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 PABPC1LQ4VXU2 614 aaKnown RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 SLC25A23Q9BV35 468 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 FTHL17Q9BXU8 183 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 ALG9Q9H6U8 611 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 RCOR3Q9P2K3 495 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 ALOX12P18054 663 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 KLRC2P26717 231 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 SP3Q02447 781 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 TSC22D1Q15714 1073 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 SDHAF4Q5VUM1 108 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 AAGABQ6PD74 315 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 KBTBD2Q8IY47 623 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 CENPLQ8N0S6 344 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 OLFM1Q99784 485 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 DPY30Q9C005 99 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 DNMT3LQ9UJW3 386 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 MGAT4DA6NG13 374 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 PAPSS1O43252 624 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 SYNCRIPO60506 623 aaKnown RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 ATP5F1P24539 256 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 CAMK2GQ13555 558 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 BRMS1LQ5PSV4 323 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 ASZ1Q8WWH4 475 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 FZD8Q9H461 694 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 FBXO5Q9UKT4 447 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 TMEM114B3SHH9 223 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 AGPSO00116 658 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 NFKBIEO00221 500 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 PENKP01210 267 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 CLCN5P51795 746 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 IL2P60568 153 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 PGS1Q32NB8 556 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 SLC10A6Q3KNW5 377 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 TBCELQ5QJ74 424 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 C11orf96Q7Z7L8 435 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 GALNT6Q8NCL4 622 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 GPATCH1Q9BRR8 931 aaKnown RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 C2orf49Q9BVC5 232 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 PTPRHQ9HD43 1115 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 A0A0G2JLL6 359 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 LINC00854A0A1B0GVQ3 168 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 F8W810 466 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 CLOCKO15516 846 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 FCGR1AP12314 374 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 PTGIRP43119 386 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 FLT3LGP49771 235 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 DDR2Q16832 855 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 PRRT2Q7Z6L0 340 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 MON1AQ86VX9 555 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 FAM13CQ8NE31 585 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 NLGN2Q8NFZ4 835 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.274e-27■■■□□ 15.4
PTPRK-204ENST00000368210 FAM124BQ9H5Z6 455 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 PIF1Q9H611 641 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 SFMBT1Q9UHJ3 866 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 GNG14A0A1W2PPG7 69 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 RGS20O76081 388 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 ATF4P18848 351 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 IKBKEQ14164 716 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 QPCTQ16769 361 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 MIER2Q8N344 545 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 POC5Q8NA72 575 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 STAG3L4Q8TBR4 150 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 DIS3LQ8TF46 1054 aaKnown RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 SLC44A1Q8WWI5 657 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 C19orf60Q96EN9 201 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 KCTD14Q9BQ13 255 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 SLC17A7Q9P2U7 560 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 SLC27A5Q9Y2P5 690 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 BOP1Q14137 746 aaKnown RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 PFKFB4Q16877 469 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 TMEM53Q6P2H8 277 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 PRMT9Q6P2P2 845 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 POTEHQ6S545 545 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 LRRC8DQ7L1W4 858 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 DHFR2Q86XF0 187 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 GPSM1Q86YR5 675 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 FAM120BQ96EK7 910 aaKnown RBP13.36□□□□□ -0.27
PTPRK-204ENST00000368210 TMEM109Q9BVC6 243 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 DPP7Q9UHL4 492 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 DYRK1BQ9Y463 629 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
PTPRK-204ENST00000368210 CD48P09326 243 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 CCNA2P20248 432 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 KRT20P35900 424 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 MAXP61244 160 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 FRG1Q14331 258 aaKnown RBP13.35□□□□□ -0.27
PTPRK-204ENST00000368210 PPP4R4Q6NUP7 873 aa13.35□□□□□ -0.27
PTPRK-204ENST00000368210 PIWIL4Q7Z3Z4 852 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms