RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 VPS13AQ96RL7 3174 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 CCDC195A0A1B0GUA6 201 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 ARHGEF37A1IGU5 675 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 GOLGA8IPA6NC78 632 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 TMEM221A6NGB7 291 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 GOLGA8JA6NMD2 632 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 C2CD4DB7Z1M9 353 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 H7C4K7 107 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 M0R296 226 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 FRS3O43559 492 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 MFAP3LO75121 409 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 MATN4O95460 622 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 LDHAP00338 332 aaKnown RBP8.24□□□□□ -1.09
YBX3-204ENST00000366290 WEE2P0C1S8 567 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 TYMPP19971 482 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 CCNE1P24864 410 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 CASP4P49662 377 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 ACOT2P49753 483 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 LILRA4P59901 499 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 TMEM132DQ14C87 1099 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 NFIL3Q16649 462 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 C9orf57Q5W0N0 161 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 TPGS2Q68CL5 300 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 ANKRD40Q6AI12 368 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 JADE1Q6IE81 842 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 TTI2Q6NXR4 508 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 ARMCX5Q6P1M9 558 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 CEP57Q86XR8 500 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 PALB2Q86YC2 1186 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 BRSK2Q8IWQ3 736 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 APPL2Q8NEU8 664 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 BEST2Q8NFU1 509 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 NLGN4YQ8NFZ3 816 aaPredicted RBP8.24□□□□□ -1.09
YBX3-204ENST00000366290 OR52N2Q8NGI0 321 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 CXorf38Q8TB03 319 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 SAAL1Q96ER3 474 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 SLC39A13Q96H72 371 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 MRGPRX1Q96LB2 322 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 SSBP3Q9BWW4 388 aaPredicted RBP8.24□□□□□ -1.09
YBX3-204ENST00000366290 NAA15Q9BXJ9 866 aaKnown RBP8.24□□□□□ -1.09
YBX3-204ENST00000366290 FBXO34Q9NWN3 711 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 CGNQ9P2M7 1197 aaKnown RBP8.24□□□□□ -1.09
YBX3-204ENST00000366290 CLCA2Q9UQC9 943 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 CDY1Q9Y6F8 540 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 DCHS1Q96JQ0 3298 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 WDR87Q6ZQQ6 2873 aa8.24□□□□□ -1.09
YBX3-204ENST00000366290 WDR27A2RRH5 827 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 B8ZZF3 427 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 I3L4J1 428 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 PRRG2O14669 202 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 EXTL3O43909 919 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 N4BP1O75113 896 aaKnown RBP8.23□□□□□ -1.09
YBX3-204ENST00000366290 SLC43A1O75387 559 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 HAUS5O94927 633 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 NR3C1P04150 777 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 SPATA31D3P0C874 917 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 KITP10721 976 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 MYF5P13349 255 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 CYP2J2P51589 502 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 STX17P56962 302 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 ROR1Q01973 937 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 SPAG1Q07617 926 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 BRD3Q15059 726 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 EDRF1Q3B7T1 1238 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 ZSCAN23Q3MJ62 389 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 KLHL10Q6JEL2 608 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 FOXR2Q6PJQ5 311 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 SPATA31D4Q6ZUB0 917 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 C11orf57Q6ZUT1 292 aaPredicted RBP8.23□□□□□ -1.09
YBX3-204ENST00000366290 CBWD2Q8IUF1 395 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 EFCAB13Q8IY85 973 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 KRT78Q8N1N4 520 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 GPD1LQ8N335 351 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 TDRD5Q8NAT2 981 aaKnown RBP8.23□□□□□ -1.09
YBX3-204ENST00000366290 MLKLQ8NB16 471 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 GOLGA5Q8TBA6 731 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 NELFBQ8WX92 580 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 SMG7Q92540 1137 aaKnown RBP8.23□□□□□ -1.09
YBX3-204ENST00000366290 APIPQ96GX9 242 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 DHTKD1Q96HY7 919 aaPredicted RBP8.23□□□□□ -1.09
YBX3-204ENST00000366290 GSTO2Q9H4Y5 243 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 KIAA1586Q9HCI6 787 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 DPP3Q9NY33 737 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 JKAMPQ9P055 326 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 EPS15L1Q9UBC2 864 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 FBXL5Q9UKA1 691 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 ZDHHC8Q9ULC8 765 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 PHTF1Q9UMS5 762 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 CLUHO75153 1309 aa8.23□□□□□ -1.09
YBX3-204ENST00000366290 SPTBN4Q9H254 2564 aa8.22□□□□□ -1.09
YBX3-204ENST00000366290 SYCE3A1L190 88 aa8.22□□□□□ -1.09
YBX3-204ENST00000366290 PSMA7O14818 248 aa8.22□□□□□ -1.09
YBX3-204ENST00000366290 PPEF2O14830 753 aa8.22□□□□□ -1.09
YBX3-204ENST00000366290 CALUO43852 315 aaPredicted RBP8.22□□□□□ -1.09
YBX3-204ENST00000366290 AKAP3O75969 853 aa8.22□□□□□ -1.09
YBX3-204ENST00000366290 KIF20AO95235 890 aa8.22□□□□□ -1.09
YBX3-204ENST00000366290 HDCP19113 662 aa8.22□□□□□ -1.09
YBX3-204ENST00000366290 HK1P19367 917 aa8.22□□□□□ -1.09
YBX3-204ENST00000366290 NR2F2P24468 414 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms