RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TPGS2Q68CL5 300 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 PLD4Q96BZ4 506 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 KLQ9UEF7 1012 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 RAB23Q9ULC3 237 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 CD3EAPO15446 510 aaKnown RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 ARHGEF9O43307 516 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 ULK1O75385 1050 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 C1RP00736 705 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 ANXA6P08133 673 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 CNPP09543 421 aaKnown RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 PTPN2P17706 415 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 FLT3P36888 993 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 PLK1P53350 603 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 ARHGAP1Q07960 439 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 VARS2Q5ST30 1063 aaKnown RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 PSRC1Q6PGN9 363 aaPredicted RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 CHMP1BQ7LBR1 199 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 CACUL1Q86Y37 369 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 ALG3Q92685 438 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 USP7Q93009 1102 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 C11orf84Q9BUA3 381 aaPredicted RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 NDST3O95803 873 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 NEK2P51955 445 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 JAM2P57087 298 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 DEFA1P59665 94 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 DEFA3P59666 94 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 CCDC85BQ15834 202 aaPredicted RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 KHDRBS2Q5VWX1 349 aaKnown RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 KLHL35Q6PF15 583 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 PAWRQ96IZ0 340 aaKnown RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 B3GNT5Q9BYG0 378 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 GPR88Q9GZN0 384 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 RHOJQ9H4E5 214 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 SLC28A1O00337 649 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 LRCH4O75427 683 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 EPN2O95208 641 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 PRNPP04156 253 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 GSTM1P09488 218 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 GTF2E2P29084 291 aaKnown RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 HGSNATQ68CP4 663 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 SLC41A1Q8IVJ1 513 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 BTN2A2Q8WVV5 523 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 ACE2Q9BYF1 805 aaPredicted RBP13.57□□□□□ -0.24
LDB3-202ENST00000361373 NDOR1Q9UHB4 597 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 VWA7Q9Y334 891 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 COL6A2P12110 1019 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 SPIDRQ14159 915 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 TMEM154Q6P9G4 183 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 IYDQ6PHW0 289 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 EID3Q8N140 333 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 DBF4BQ8NFT6 615 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 SPPL2AQ8TCT8 520 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 HDAC10Q969S8 669 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 KLHL4Q9C0H6 718 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 IL1RAPL1Q9NZN1 696 aa13.57□□□□□ -0.24
LDB3-202ENST00000361373 RECQL5O94762 991 aaPredicted RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 LDLRP01130 860 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 CLTBP09497 229 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 UQCRBP14927 111 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 SCNN1AP37088 669 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 HADHBP55084 474 aaKnown RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 TRIP4Q15650 581 aaPredicted RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 ZNF786Q8N393 782 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 TERB1Q8NA31 727 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 SEMA4BQ9NPR2 832 aaPredicted RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 PHPT1Q9NRX4 125 aaPredicted RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 GTF2IRD1Q9UHL9 959 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 SPEF2Q9C093 1822 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 ARVCFO00192 962 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 CNOT3O75175 753 aaKnown RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 COX7A2P14406 83 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 ATP6V1C1P21283 382 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 NDST2P52849 883 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 TRAF2Q12933 501 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 NPY5RQ15761 445 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 DLG3Q92796 817 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 RAP2CQ9Y3L5 183 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 E9PAM4 449 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 RPA3P35244 121 aaPredicted RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 AP1S1P61966 158 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 COL9A3Q14050 684 aaPredicted RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 PLEKHM3Q6ZWE6 761 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 COLGALT2Q8IYK4 626 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 TCAIMQ8N3R3 496 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 LEMD2Q8NC56 503 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 RIPOR3Q96MK2 946 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 TMEM245Q9H330 911 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 AGO3Q9H9G7 860 aaKnown RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 NEDD8-MDP1E9PL57 170 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 MAP2K7O14733 419 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 PRMT5O14744 637 aaPredicted RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 NOL4O94818 638 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 SLC25A14O95258 325 aaPredicted RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 PCSK2P16519 638 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 MAXP61244 160 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 CRADDP78560 199 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 NCF4Q15080 339 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 SNX32Q86XE0 403 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms