RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ZNF77Q15935 545 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 UGP2Q16851 508 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 RARS2Q5T160 578 aaKnown RBP13.64□□□□□ -0.23
CCDC197-201ENST00000359253 STXBP5Q5T5C0 1151 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 TMC5Q6UXY8 1006 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 GRASPQ7Z6J2 395 aaPredicted RBP13.64□□□□□ -0.23
CCDC197-201ENST00000359253 OR52K2Q8NGK3 314 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 TCEAL4Q96EI5 215 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 ALG14Q96F25 216 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 SCUBE2Q9NQ36 999 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
CCDC197-201ENST00000359253 MKS1Q9NXB0 559 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 OBP2AQ9NY56 170 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 MARK1Q9P0L2 795 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 USP15Q9Y4E8 981 aaPredicted RBP13.64□□□□□ -0.23
CCDC197-201ENST00000359253 BRWD1Q9NSI6 2320 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 HELZP42694 1942 aaKnown RBP13.64□□□□□ -0.23
CCDC197-201ENST00000359253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.63□□□□□ -0.23
CCDC197-201ENST00000359253 NDST3O95803 873 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 KRT4P19013 534 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 CSKP41240 450 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 MAXP61244 160 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 AP1S1P61966 158 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 CRADDP78560 199 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 ARF5P84085 180 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 GUCY1A3Q02108 690 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 SLC18A2Q05940 514 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 EFTUD2Q15029 972 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC197-201ENST00000359253 SLC5A9Q2M3M2 681 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 FAM182AQ5T1J6 154 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 KIAA0930Q6ICG6 404 aaPredicted RBP13.63□□□□□ -0.23
CCDC197-201ENST00000359253 TRMT10BQ6PF06 316 aaKnown RBP13.63□□□□□ -0.23
CCDC197-201ENST00000359253 KCNMB4Q86W47 210 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 C12orf76Q8N812 135 aaPredicted RBP13.63□□□□□ -0.23
CCDC197-201ENST00000359253 CALML6Q8TD86 181 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 SCG3Q8WXD2 468 aaKnown RBP13.63□□□□□ -0.23
CCDC197-201ENST00000359253 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 IRF7Q92985 503 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 FCRL3Q96P31 734 aaPredicted RBP13.63□□□□□ -0.23
CCDC197-201ENST00000359253 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
CCDC197-201ENST00000359253 APOL2Q9BQE5 337 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 ADGRE3Q9BY15 652 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 EPN3Q9H201 632 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 CHRAC1Q9NRG0 131 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 ABCB8Q9NUT2 735 aa13.63□□□□□ -0.23
CCDC197-201ENST00000359253 GMNCA6NCL1 334 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 CXorf49A8MYA2 514 aaPredicted RBP13.62□□□□□ -0.23
CCDC197-201ENST00000359253 TIMM44O43615 452 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 TYROBPO43914 113 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 SIN3BO75182 1162 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 TPH1P17752 444 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 MZF1P28698 734 aaPredicted RBP13.62□□□□□ -0.23
CCDC197-201ENST00000359253 PDE1BQ01064 536 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 IL9RQ01113 521 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 SEPT7Q16181 437 aaKnown RBP13.62□□□□□ -0.23
CCDC197-201ENST00000359253 PCSK7Q16549 785 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 PLEKHG6Q3KR16 790 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 FSCBQ5H9T9 825 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 TEDDM1Q5T9Z0 273 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 PACS1Q6VY07 963 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 KIAA0408Q6ZU52 694 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 GALNT7Q86SF2 657 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 RASSF3Q86WH2 238 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 ARID3BQ8IVW6 561 aaPredicted RBP13.62□□□□□ -0.23
CCDC197-201ENST00000359253 CNTN4Q8IWV2 1026 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 ADHFE1Q8IWW8 467 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 BRSK1Q8TDC3 778 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 DYDC1Q8WWB3 177 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 ISG20Q96AZ6 181 aaKnown RBP13.62□□□□□ -0.23
CCDC197-201ENST00000359253 MRRFQ96E11 262 aaKnown RBP13.62□□□□□ -0.23
CCDC197-201ENST00000359253 MFSD3Q96ES6 412 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 C19orf43Q9BQ61 176 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 FAM167BQ9BTA0 163 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 SPHK2Q9NRA0 654 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 SMYD2Q9NRG4 433 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 TREX1Q9NSU2 369 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 C20orf96Q9NUD7 363 aaPredicted RBP13.62□□□□□ -0.23
CCDC197-201ENST00000359253 GDE1Q9NZC3 331 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 HACD3Q9P035 362 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 VPS51Q9UID3 782 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
CCDC197-201ENST00000359253 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 TRIM49D1C9J1S8 452 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 MUSKO15146 869 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 TMCC1O94876 653 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 CRTAMO95727 393 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 CD160O95971 181 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 ATXN1LP0C7T5 689 aaKnown RBP13.61□□□□□ -0.23
CCDC197-201ENST00000359253 CCT5P48643 541 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
CCDC197-201ENST00000359253 SCNN1BP51168 640 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 RPL26P61254 145 aaKnown RBP13.61□□□□□ -0.23
CCDC197-201ENST00000359253 LMAN2Q12907 356 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 MSLNQ13421 630 aaPredicted RBP13.61□□□□□ -0.23
CCDC197-201ENST00000359253 OLIG2Q13516 323 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 POU6F1Q14863 301 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 SIRPB2Q5JXA9 342 aa13.61□□□□□ -0.23
CCDC197-201ENST00000359253 TSTD2Q5T7W7 516 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms