RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 SPC25Q9HBM1 224 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SUCOQ9UBS9 1254 aaKnown RBP16.37■□□□□ 0.21
MBD1-204ENST00000347968 CAB39Q9Y376 341 aaPredicted RBP16.37■□□□□ 0.21
MBD1-204ENST00000347968 SCN9AQ15858 1988 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 RAD51BO15315 384 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SSX4O60224 188 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 VNN1O95497 513 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 MTHFD1P11586 935 aaKnown RBP16.37■□□□□ 0.21
MBD1-204ENST00000347968 GTF2E2P29084 291 aaKnown RBP16.37■□□□□ 0.21
MBD1-204ENST00000347968 GRIA4P48058 902 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 NT5C2P49902 561 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 KIZQ2M2Z5 673 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 TBPL2Q6SJ96 375 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 SLC16A12Q6ZSM3 486 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 PODNQ7Z5L7 613 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 DCLK2Q8N568 766 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 MTMR12Q9C0I1 747 aa16.37■□□□□ 0.21
MBD1-204ENST00000347968 UPF3AQ9H1J1 476 aaKnown RBP16.37■□□□□ 0.21
MBD1-204ENST00000347968 YDJCA8MPS7 323 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 ARHGAP33O14559 1287 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 RGS13O14921 159 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 RAD17O75943 681 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 HMGCRP04035 888 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 ITGB6P18564 788 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 LEPRP48357 1165 aaKnown RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 NUMBP49757 651 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 RARRES1P49788 294 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 HLCSP50747 726 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 RPL14P50914 215 aaKnown RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 GTF2BQ00403 316 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 GALK2Q01415 458 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 REP15Q6BDI9 236 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 GTF2IRD2BQ6EKJ0 949 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 DPH6Q7L8W6 267 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 R3HCC1LQ7Z5L2 792 aaKnown RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 GTF2IRD2Q86UP8 949 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 WDTC1Q8N5D0 677 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 DACH2Q96NX9 599 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 PEBP4Q96S96 227 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 TMEM246Q9BRR3 403 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 TTYH2Q9BSA4 534 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 TOR3AQ9H497 397 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 PIF1Q9H611 641 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 TDRD3Q9H7E2 651 aaKnown RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 ZNF277Q9NRM2 450 aaPredicted RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 IL37Q9NZH6 218 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 ENPP5Q9UJA9 477 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 SCAF8Q9UPN6 1271 aaKnown RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 PSME4Q14997 1843 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 DDTLA6NHG4 134 aaPredicted RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 A8MX80 341 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 TRIM13O60858 407 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 GPC4O75487 556 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 UGT2B4P06133 528 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 LAMC2Q13753 1193 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 SCYL2Q6P3W7 929 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 ADCK1Q86TW2 530 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 FAM83FQ8NEG4 500 aaPredicted RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 BSNDQ8WZ55 320 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 PMEPA1Q969W9 287 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 SEZ6LQ9BYH1 1024 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 RSAD1Q9HA92 442 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 CCDC177Q9NQR7 707 aaPredicted RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 THG1LQ9NWX6 298 aaKnown RBP16.36■□□□□ 0.21
MBD1-204ENST00000347968 CACNA2D2Q9NY47 1150 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 PCDHA11Q9Y5I1 949 aa16.36■□□□□ 0.21
MBD1-204ENST00000347968 IGKV6D-41A0A0C4DH26 115 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 M0R3G1 203 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 BMP2P12643 396 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
MBD1-204ENST00000347968 CD40LGP29965 261 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 CYP2C18P33260 490 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 SHMT1P34896 483 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 AVPR1AP37288 418 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 CAPGP40121 348 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 ACADSBP45954 432 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 CAPRIN1Q14444 709 aaKnown RBP16.35■□□□□ 0.21
MBD1-204ENST00000347968 NOMO1Q15155 1222 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 HADHQ16836 314 aaKnown RBP16.35■□□□□ 0.21
MBD1-204ENST00000347968 PMF1Q6P1K2 205 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 ZNF773Q6PK81 442 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 CYP20A1Q6UW02 462 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 PAGE2Q7Z2X7 111 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 TFAP2BQ92481 460 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 HDAC10Q969S8 669 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 OMDQ99983 421 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 PAK5Q9P286 719 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 PMF1-BGLAPU3KQ54 211 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 DYRK3O43781 588 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 DEAF1O75398 565 aaPredicted RBP16.35■□□□□ 0.21
MBD1-204ENST00000347968 SCO1O75880 301 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 NCK1P16333 377 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 MGAT1P26572 445 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 PTPN7P35236 360 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 DGCR6Q14129 220 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 UGCGQ16739 394 aa16.35■□□□□ 0.21
MBD1-204ENST00000347968 DCP2Q8IU60 420 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms