RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CRTAMO95727 393 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MAOBP27338 520 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ADH7P40394 386 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SMIM11AP58511 58 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MPP1Q00013 466 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 KCNC4Q03721 635 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 EIF4E3Q8N5X7 224 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 FAM167AQ96KS9 214 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RTKNQ9BST9 563 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SLC6A17Q9H1V8 727 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SLC9A2Q9UBY0 812 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM82A0PJX8 343 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 K7ERI5 159 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GCNT3O95395 438 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 OAS1P00973 400 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 AGTR1P30556 359 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 THAP5Q7Z6K1 395 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RPL3LQ92901 407 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RDH8Q9NYR8 311 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 VPS9D1Q9Y2B5 631 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SSNA1O43805 119 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 HOXB8P17481 243 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CKMT2P17540 419 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ARL3P36405 182 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 YWHAGP61981 247 aaKnown RBP eCLIP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RPS6P62753 249 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NOMO3P69849 1222 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GNA13Q14344 377 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NOMO1Q15155 1222 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GTF2H5Q6ZYL4 71 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CIR1Q86X95 450 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PLPP6Q8IY26 295 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SLFN12Q8IYM2 578 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 C7orf57Q8NEG2 295 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SLC12A5Q9H2X9 1139 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RIBC2Q9H4K1 309 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CMTM6Q9NX76 183 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 UBQLN2Q9UHD9 624 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PALLDQ8WX93 1383 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 KDSRQ06136 332 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZIK1Q3SY52 487 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SPOPLQ6IQ16 392 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NUP54Q7Z3B4 507 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 COL4A3BPQ9Y5P4 624 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TIPRLO75663 272 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZDHHC11BP0C7U3 371 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NAT2P11245 290 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 DARSP14868 501 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CYP3A5P20815 502 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 HSD17B3P37058 310 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 HAAOP46952 286 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SLITRK4Q8IW52 837 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM59LQ9UK28 342 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MBP02144 154 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CHRNB1P11230 501 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PON3Q15166 354 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MAGEB6Q8N7X4 407 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 FAM46DQ8NEK8 389 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 OR8H1Q8NGG4 311 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF419Q96HQ0 510 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 HS6ST2Q96MM7 605 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CA5BQ9Y2D0 317 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ANKRD34BA5PLL1 514 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MEN1O00255 615 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SSX4O60224 188 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ERBB2P04626 1255 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RARAP10276 462 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SDC2P34741 201 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CAPZA2P47755 286 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CCR3P51677 355 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 EIF3EP60228 445 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NCS1P62166 190 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 VLDLRP98155 873 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 LRRC24Q50LG9 513 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 AFTPHQ6ULP2 937 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CENPSQ8N2Z9 138 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 C10orf90Q96M02 699 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CITED2Q99967 270 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 FBXO8Q9NRD0 319 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RIC8BQ9NVN3 520 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 THG1LQ9NWX6 298 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RBMX2Q9Y388 322 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NR5A2O00482 541 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 VILLO15195 856 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MED7O43513 233 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZPR1O75312 459 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MYO1DO94832 1006 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NADKO95544 446 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PCDH1Q08174 1060 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SEC23AQ15436 765 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 STXBP2Q15833 593 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 INTS11Q5TA45 600 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 DPPA2Q7Z7J5 298 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CHSY1Q86X52 802 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SVBPQ8N300 66 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 HDAC2Q92769 488 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RIPOR3Q96MK2 946 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHGA8Q9Y5G5 932 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SRPRBQ9Y5M8 271 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF335Q9H4Z2 1342 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms