RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 F5P12259 2224 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 LOC285095A0A1B0GVY8 99 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 WASH3PC4AMC7 463 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 PIGNO95427 931 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 ATXN1LP0C7T5 689 aaKnown RBP13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 TPH1P17752 444 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 TNNT3P45378 269 aaPredicted RBP13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 CCNHP51946 323 aaPredicted RBP13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 SEC13P55735 322 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 CDK18Q07002 472 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 FSTL4Q6MZW2 842 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 NUDT18Q6ZVK8 323 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 CAMK1DQ8IU85 385 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 ANKMY2Q8IV38 441 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 IGDCC3Q8IVU1 814 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 ZBED8Q8IZ13 594 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 MPP5Q8N3R9 675 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 DNAAF3Q8N9W5 541 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 KDM1BQ8NB78 822 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 PTPRN2Q92932 1015 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 FEM1CQ96JP0 617 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 TSPYL1Q9H0U9 437 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 TMEM245Q9H330 911 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 ARFGAP3Q9NP61 516 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 DUSP12Q9UNI6 340 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 CHKBQ9Y259 395 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 STARD13Q9Y3M8 1113 aa13.48□□□□□ -0.25
GTF2F2-201ENST00000340473 EGFP01133 1207 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 PRLP01236 227 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 PDHA1P08559 390 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 PRKCHP24723 683 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 MGAT1P26572 445 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 IL12RB1P42701 662 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 MAGEA4P43358 317 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 TNFRSF4P43489 277 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 CRADDP78560 199 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 CDH17Q12864 832 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SLC1A5Q15758 541 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SLC44A4Q53GD3 710 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 TMEM196Q5HYL7 178 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SIRPB2Q5JXA9 342 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SERPINA13PQ6UXR4 307 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 IFT43Q96FT9 208 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SIGLEC10Q96LC7 697 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 C9orf72Q96LT7 481 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 PHACTR1Q9C0D0 580 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SEMA4AQ9H3S1 761 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 ZDHHC6Q9H6R6 413 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 CACNA2D2Q9NY47 1150 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 ALOX15BO15296 676 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 EIF3HO15372 352 aaKnown RBP eCLIP13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 GLULP15104 373 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 ELK3P41970 407 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 KIR2DL1P43626 348 aaPredicted RBP13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 MAPK8P45983 427 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 PMS2P54278 862 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 CBLBQ13191 982 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 GALNT3Q14435 633 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 HNRNPA1L2Q32P51 320 aaKnown RBP13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 DNAJC21Q5F1R6 531 aaKnown RBP13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 CERCAMQ5T4B2 595 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 RELL1Q8IUW5 271 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 FBXO36Q8NEA4 188 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 PDCD6IPQ8WUM4 868 aaKnown RBP13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 CDC42EP4Q9H3Q1 356 aaKnown RBP13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 ARNT2Q9HBZ2 717 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 SYBUQ9NX95 663 aa13.47□□□□□ -0.25
GTF2F2-201ENST00000340473 TCF20Q9UGU0 1960 aaKnown RBP13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 TRAFD1O14545 582 aaPredicted RBP13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 POP4O95707 220 aaKnown RBP13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 EPOP01588 193 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 HNRNPLP14866 589 aaKnown RBP eCLIP13.46□□□□□ -0.252e-7■■■■□ 24.6
GTF2F2-201ENST00000340473 RECQLP46063 649 aaPredicted RBP13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 BCL2L1Q07817 233 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 DMTNQ08495 405 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 DENND2CQ68D51 928 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 MREGQ8N565 214 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 ZNF513Q8N8E2 541 aaPredicted RBP13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 TRIM56Q9BRZ2 755 aaKnown RBP13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 ATP13A3Q9H7F0 1226 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 NINJ2Q9NZG7 142 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 CHMP2BQ9UQN3 213 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 TEX264Q9Y6I9 313 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 WASF2Q9Y6W5 498 aa13.46□□□□□ -0.25
GTF2F2-201ENST00000340473 EDDM13A0A1B0GTR0 161 aa13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 SDR42E2A6NKP2 422 aa13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 HTRA2O43464 458 aaPredicted RBP13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 FZD6O60353 706 aa13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 NDST3O95803 873 aa13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 CTSLP07711 333 aa13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 CD72P21854 359 aa13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 TIE1P35590 1138 aa13.45□□□□□ -0.26
GTF2F2-201ENST00000340473 GRSF1Q12849 480 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms