RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ZNF599Q96NL3 588 aa14.78□□□□□ -0.04
ERCC1-203ENST00000340192 CINPQ9BW66 212 aaPredicted RBP14.78□□□□□ -0.04
ERCC1-203ENST00000340192 CALN1Q9BXU9 219 aa14.78□□□□□ -0.04
ERCC1-203ENST00000340192 ERVMER34-1Q9H9K5 563 aa14.78□□□□□ -0.04
ERCC1-203ENST00000340192 KLHL11Q9NVR0 708 aa14.78□□□□□ -0.04
ERCC1-203ENST00000340192 DKK3Q9UBP4 350 aa14.78□□□□□ -0.04
ERCC1-203ENST00000340192 ANGPTL2Q9UKU9 493 aa14.78□□□□□ -0.04
ERCC1-203ENST00000340192 CABIN1Q9Y6J0 2220 aa14.78□□□□□ -0.04
ERCC1-203ENST00000340192 WDFY3Q8IZQ1 3526 aa14.78□□□□□ -0.04
ERCC1-203ENST00000340192 MUSKO15146 869 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 BUB1BO60566 1050 aaPredicted RBP14.77□□□□□ -0.05
ERCC1-203ENST00000340192 MAGEC1O60732 1142 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 PAK4O96013 591 aaPredicted RBP14.77□□□□□ -0.05
ERCC1-203ENST00000340192 KRT7P08729 469 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 THEGLP0DJG4 465 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 TIMP2P16035 220 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 GRK6P43250 576 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 CSNK1DP48730 415 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 ARRB1P49407 418 aaPredicted RBP14.77□□□□□ -0.05
ERCC1-203ENST00000340192 ZNF75DP51815 510 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 CLDN2P57739 230 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 SHC2P98077 582 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 SLC10A7Q0GE19 358 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 SGCGQ13326 291 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 MESDQ14696 234 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 LBRQ14739 615 aaKnown RBP14.77□□□□□ -0.05
ERCC1-203ENST00000340192 TMCO4Q5TGY1 634 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 GCNT7Q6ZNI0 430 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 ZSCAN30Q86W11 494 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 GATAD2AQ86YP4 633 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 CAMK1DQ8IU85 385 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 HCAR2Q8TDS4 363 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 ZNF641Q96N77 438 aaPredicted RBP14.77□□□□□ -0.05
ERCC1-203ENST00000340192 TUBGCP5Q96RT8 1024 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 C1QTNF2Q9BXJ5 285 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 SUV39H2Q9H5I1 410 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 WASF3Q9UPY6 502 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 FRYQ5TBA9 3013 aa14.77□□□□□ -0.05
ERCC1-203ENST00000340192 COL5A1P20908 1838 aaPredicted RBP14.76□□□□□ -0.05
ERCC1-203ENST00000340192 ASPMQ8IZT6 3477 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 TSPAN11A1L157 253 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 RAD51BO15315 384 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 YKT6O15498 198 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 MAFKO60675 156 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 MTA2O94776 668 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 TOP3BO95985 862 aaKnown RBP14.76□□□□□ -0.05
ERCC1-203ENST00000340192 PEX11BO96011 259 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 ITIH2P19823 946 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 XPAP23025 273 aaPredicted RBP14.76□□□□□ -0.05
ERCC1-203ENST00000340192 ARHGAP25P42331 645 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 NSUN2Q08J23 767 aaKnown RBP eCLIP14.76□□□□□ -0.05
ERCC1-203ENST00000340192 PDK2Q15119 407 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 ANKRD20A8PQ5CZ79 823 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 ABI3BPQ7Z7G0 1075 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 GLRX5Q86SX6 157 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 GAS2L3Q86XJ1 694 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 RHOT2Q8IXI1 618 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 OXR1Q8N573 874 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 ATPAF2Q8N5M1 289 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 OR13H1Q8NG92 308 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 SAP25Q8TEE9 199 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 RFFLQ8WZ73 363 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 PSKH2Q96QS6 385 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 CDC6Q99741 560 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 ZNF670Q9BS34 389 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 ATP13A3Q9H7F0 1226 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 SEPT3Q9UH03 358 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 INTUQ9ULD6 942 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 HS3ST3A1Q9Y663 406 aa14.76□□□□□ -0.05
ERCC1-203ENST00000340192 POM121BA6NF01 834 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 A6NNZ2 444 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 MFSD11O43934 449 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 MMP20O60882 483 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 ITGAVP06756 1048 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 FTH1P19P0C7X4 201 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 EPHA8P29322 1005 aaPredicted RBP14.75□□□□□ -0.05
ERCC1-203ENST00000340192 SERPINA4P29622 427 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 RXRGP48443 463 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 SCNN1BP51168 640 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 RENBPP51606 427 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 BCL2L1Q07817 233 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 ZNF235Q14590 738 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 UGP2Q16851 508 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 INAVAQ3KP66 663 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 ZFYVE27Q5T4F4 411 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 CFAP58Q5T655 872 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 NCBP2-AS2Q69YL0 99 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 BRAT1Q6PJG6 821 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 Q6ZSR6 202 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 PTAR1Q7Z6K3 402 aaPredicted RBP14.75□□□□□ -0.05
ERCC1-203ENST00000340192 ZSWIM9Q86XI8 627 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 MAP7D3Q8IWC1 876 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 SLC22A18ASQ8N1D0 253 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 PCDH19Q8TAB3 1148 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 CXorf40AQ8TE69 158 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 MRFAP1L1Q96HT8 127 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 BMFQ96LC9 184 aa14.75□□□□□ -0.05
ERCC1-203ENST00000340192 LENG8Q96PV6 779 aaPredicted RBP14.75□□□□□ -0.05
ERCC1-203ENST00000340192 KLF6Q99612 283 aaPredicted RBP14.75□□□□□ -0.05
ERCC1-203ENST00000340192 WRAP53Q9BUR4 548 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms