RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NSMCE3Q96MG7 304 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 OLFM3Q96PB7 478 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 TUBGCP5Q96RT8 1024 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 MGME1Q9BQP7 344 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 ORAI3Q9BRQ5 295 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 HEMGNQ9BXL5 484 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 SUV39H2Q9H5I1 410 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 EBF2Q9HAK2 575 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 PREBQ9HCU5 417 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 NT5MQ9NPB1 228 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 LZTFL1Q9NQ48 299 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 FSCN3Q9NQT6 498 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 RXFP3Q9NSD7 469 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 SAE1Q9UBE0 346 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 A0A1W2PPC4 97 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 BCAT2O15382 392 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-201ENST00000340074 PCDH8O95206 1070 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 CCNB1P14635 433 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 PECAM1P16284 738 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-201ENST00000340074 CR2P20023 1033 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 TGM2P21980 687 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 CD27P26842 260 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 MAT2AP31153 395 aaKnown RBP15.42■□□□□ 0.06
UBE3B-201ENST00000340074 ABL2P42684 1182 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 COPS2P61201 443 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 AP1B1Q10567 949 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 GSE1Q14687 1217 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 PPP2R5EQ16537 467 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 LRRC73Q5JTD7 316 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 ZNF662Q6ZS27 426 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 B4GALNT4Q76KP1 1039 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 TRIM69Q86WT6 500 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 FATE1Q969F0 183 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 ZNF641Q96N77 438 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-201ENST00000340074 NUSAP1Q9BXS6 441 aaKnown RBP15.42■□□□□ 0.06
UBE3B-201ENST00000340074 ATP13A3Q9H7F0 1226 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 SCUBE2Q9NQ36 999 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 DKK3Q9UBP4 350 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 SUSD2Q9UGT4 822 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 PPP2R2CQ9Y2T4 447 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 FADS3Q9Y5Q0 445 aa15.42■□□□□ 0.06
UBE3B-201ENST00000340074 A0A1B0GTW7 788 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 LNP1A1A4G5 178 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 MIF4GDA9UHW6 222 aaKnown RBP15.41■□□□□ 0.06
UBE3B-201ENST00000340074 PPP1R12AO14974 1030 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-201ENST00000340074 LATO43561 262 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 AP1G1O43747 822 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 GDF9O60383 454 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 FOXD2O60548 495 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-201ENST00000340074 RNGTTO60942 597 aaKnown RBP15.41■□□□□ 0.06
UBE3B-201ENST00000340074 PTMAP06454 111 aaKnown RBP15.41■□□□□ 0.06
UBE3B-201ENST00000340074 SERPINF2P08697 491 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 PYGMP11217 842 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 TIMP2P16035 220 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 SERPINA4P29622 427 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 NR2C2P49116 596 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 AP1S1P61966 158 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 LMNB2Q03252 620 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 BCL2L1Q07817 233 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 ITKQ08881 620 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 PDK1Q15118 436 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 AASDHQ4L235 1098 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-201ENST00000340074 AADACL2Q6P093 401 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 NEK5Q6P3R8 708 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 RABEPKQ7Z6M1 372 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 TTC7BQ86TV6 843 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 PRPF39Q86UA1 669 aaKnown RBP15.41■□□□□ 0.06
UBE3B-201ENST00000340074 ZSWIM9Q86XI8 627 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 UBL4BQ8N7F7 174 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 HCAR2Q8TDS4 363 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 RAB7BQ96AH8 199 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 PDLIM2Q96JY6 352 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 NUDCD1Q96RS6 583 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 HERPUD2Q9BSE4 406 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 NOD2Q9HC29 1040 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 CAPN10Q9HC96 672 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 RBM22Q9NW64 420 aaKnown RBP eCLIP15.41■□□□□ 0.06
UBE3B-201ENST00000340074 GGT7Q9UJ14 662 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 SLC6A14Q9UN76 642 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 ITM2BQ9Y287 266 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 TTLL3Q9Y4R7 772 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 KNL1Q8NG31 2342 aa15.41■□□□□ 0.06
UBE3B-201ENST00000340074 A0A1W2PQU0 124 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 TSPAN11A1L157 253 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 KCNK1O00180 336 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 DDX3YO15523 660 aaKnown RBP15.4■□□□□ 0.06
UBE3B-201ENST00000340074 SPINT1O43278 529 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 NEBLO76041 1014 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 MAPK8P45983 427 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 FAM182AQ5T1J6 154 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 CFAP58Q5T655 872 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 SEL1L3Q68CR1 1132 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 BZW1Q7L1Q6 419 aaKnown RBP15.4■□□□□ 0.06
UBE3B-201ENST00000340074 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.4■□□□□ 0.06
UBE3B-201ENST00000340074 P3H4Q92791 437 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 KLK6Q92876 244 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 HAUS1Q96CS2 278 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 HES6Q96HZ4 224 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 SEMA3CQ99985 751 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 OSBPL8Q9BZF1 889 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms