RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 TNPO3Q9Y5L0 923 aaKnown RBP9.4□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM95CA0A1B0GW59 222 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 GOLGA8TH3BQL2 631 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 TBX18O95935 607 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 FMO4P31512 558 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 GLRBP48167 497 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 CACHD1Q5VU97 1274 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 HEPHQ9BQS7 1158 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 CATP04040 527 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 GDI1P31150 447 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 SERPINB4P48594 390 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 GPR15P49685 360 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 SKP1P63208 163 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 PPIDQ08752 370 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 OR7D4Q8NG98 312 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 NCLNQ969V3 563 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 REPS1Q96D71 796 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 MRPL1Q9BYD6 325 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 CHKBQ9Y259 395 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 SIPA1L1O43166 1804 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 MEI4A8MW99 385 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 CD3EAPO15446 510 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 CD48P09326 243 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 MLLT6P55198 1093 aaPredicted RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 FBXO39Q8N4B4 442 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 ATL1Q8WXF7 558 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 PSMG2Q969U7 264 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 ASPSCR1Q9BZE9 553 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 TEX28O15482 410 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 SNUPNO95149 360 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 POLD2P49005 469 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 LRRC26Q2I0M4 334 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 POM121L1PQ3SYA9 428 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 STXBP5Q5T5C0 1151 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 CERS6Q6ZMG9 384 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 OR10T2Q8NGX3 314 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 MAGEB10Q96LZ2 347 aaPredicted RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 DTLQ9NZJ0 730 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 SALL4Q9UJQ4 1053 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 EIF3LQ9Y262 564 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 RHOP08100 348 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 GYS2P54840 703 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 CYP1B1Q16678 543 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 ANKRD20A4Q4UJ75 823 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 PKN3Q6P5Z2 889 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 MREGQ8N565 214 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 PAAF1Q9BRP4 392 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 TULP2O00295 520 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 LMNAP02545 664 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 UGT2B4P06133 528 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 FGFR3P22607 806 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 SLC8A1P32418 973 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 PSMD8P48556 350 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 MUM1Q2TAK8 710 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 SRLQ86TD4 932 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 GPSM1Q86YR5 675 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 SLC39A11Q8N1S5 342 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 ZSCAN18Q8TBC5 510 aaPredicted RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 FAM136AQ96C01 138 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 NLNQ9BYT8 704 aa9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 NSUN3Q9H649 340 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 BRCA1P38398 1863 aaKnown RBP9.39□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3DA0A087WVF3 549 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3IA0A087WXS9 549 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3EA0A087X179 549 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3KA0A087X1G2 549 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3FA6NER0 549 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 LRRC72A6NJI9 287 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3LB9A6J9 549 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3HP0C7X1 549 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SLC25A11Q02978 314 aaKnown RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3GQ6DHY5 549 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3CQ6IPX1 549 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 BEND5Q7L4P6 421 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 RD3Q7Z3Z2 195 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PRPF39Q86UA1 669 aaKnown RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TBC1D3Q8IZP1 549 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 BEND7Q8N7W2 519 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 KBTBD7Q8WVZ9 684 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SGF29Q96ES7 293 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 HSFX1Q9UBD0 423 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 PCDHB1Q9Y5F3 818 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 NCF1BA6NI72 391 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 NCF1CA8MVU1 366 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CFHP08603 1231 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 NCF1P14598 390 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 EN2P19622 333 aaPredicted RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ZBTB6Q15916 424 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 TEDDM1Q5T9Z0 273 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 SEL1L3Q68CR1 1132 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 DOK6Q6PKX4 331 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ZDHHC7Q9NXF8 308 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 AHSPQ9NZD4 102 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 VPS51Q9UID3 782 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 HS3ST4Q9Y661 456 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 RPP40O75818 363 aaKnown RBP9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 CTPS1P17812 591 aa9.38□□□□□ -0.91
FNDC3B-201ENST00000336824 ARHGDIAP52565 204 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms