RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 MSANTD1Q6ZTZ1 278 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 ZNF670Q9BS34 389 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 GSDMCQ9BYG8 508 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 EMC3Q9P0I2 261 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 MARCH2Q9P0N8 246 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 IKZF3Q9UKT9 509 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 LRRC10BA6NIK2 292 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 BBIP1A8MTZ0 92 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 SERPINB7O75635 380 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 MAGEA2P43356 314 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 USP46P62068 366 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 FOXR2Q6PJQ5 311 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 CREG2Q8IUH2 290 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 PHC3Q8NDX5 983 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 C17orf50Q8WW18 174 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 TRMOQ9BU70 441 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 NDOR1Q9UHB4 597 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 ULK1O75385 1050 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 CBX6O95503 412 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 TUBA4AP68366 448 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 MRPS22P82650 360 aaKnown RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 PTGES3Q15185 160 aaKnown RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 HYIQ5T013 277 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 CXorf40AQ8TE69 158 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 A0A0B4J269 797 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 PGK1P00558 417 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 PSEN2P49810 448 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 ACTR3P61158 418 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 ROR2Q01974 943 aaKnown RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 TUBB3Q13509 450 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 FKBP1CQ5VVH2 108 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 DNAJC14Q6Y2X3 702 aaPredicted RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 ALLCQ8N6M5 410 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 COX4I2Q96KJ9 171 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 VPS35Q96QK1 796 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 CLCC1Q96S66 551 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 DUSP9Q99956 384 aaKnown RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 LRRC19Q9H756 370 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 ZNF224Q9NZL3 707 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 KCNK1O00180 336 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 GSSP48637 474 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 OLR1P78380 273 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 BTG3Q14201 252 aaPredicted RBP13.18□□□□□ -0.3
HLCS-201ENST00000336648 PDK4Q16654 411 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 TRIM40Q6P9F5 258 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 FAM92BQ6ZTR7 304 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 DHDDSQ86SQ9 333 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 SCUBE3Q8IX30 993 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 HASPINQ8TF76 798 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 ARMCX1Q9P291 453 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 USP32Q8NFA0 1604 aa13.18□□□□□ -0.3
HLCS-201ENST00000336648 TRAFD1O14545 582 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 SERPINA6P08185 405 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 BMP7P18075 431 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 PTGS2P35354 604 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 GRSF1Q12849 480 aaKnown RBP eCLIP13.17□□□□□ -0.3
HLCS-201ENST00000336648 PTGR2Q8N8N7 351 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 HPS1Q92902 700 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 WDR12Q9GZL7 423 aaKnown RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 SEMA4BQ9NPR2 832 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 POLR1AO95602 1720 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 E5RJQ4 531 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 C1QTNF3-AMACRE9PGA6 284 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 HDAC3O15379 428 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 POMCP01189 267 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 PRKG2Q13237 762 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 CLHC1Q8NHS4 586 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 TCF12Q99081 682 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 ULBP1Q9BZM6 244 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 ATP13A3Q9H7F0 1226 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.17□□□□□ -0.3
HLCS-201ENST00000336648 PTGFRNQ9P2B2 879 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 IRAK3Q9Y616 596 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 TSPAN3O60637 253 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 HLA-DQA2P01906 255 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 NUDT17P0C025 328 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 IDO1P14902 403 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 CHKAP35790 457 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 THOP1P52888 689 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 NRG3P56975 720 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 MTAPQ13126 283 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 TRAPPC5Q8IUR0 188 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 KAT5Q92993 513 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 ZNF607Q96SK3 696 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 PORCNQ9H237 461 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 ALG9Q9H6U8 611 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 C12orf4Q9NQ89 552 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 GPC6Q9Y625 555 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 FAM25EA8MYX2 175 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 TEX46H3BTG2 121 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 AP3D1O14617 1153 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 LIASO43766 372 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms